Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1642 | 5149;5150;5151 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
N2AB | 1642 | 5149;5150;5151 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
N2A | 1642 | 5149;5150;5151 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
N2B | 1596 | 5011;5012;5013 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
Novex-1 | 1596 | 5011;5012;5013 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
Novex-2 | 1596 | 5011;5012;5013 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
Novex-3 | 1642 | 5149;5150;5151 | chr2:178776940;178776939;178776938 | chr2:179641667;179641666;179641665 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs943254434 | None | 1.0 | N | 0.783 | 0.416 | 0.353974658523 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/S | rs943254434 | None | 1.0 | N | 0.783 | 0.416 | 0.353974658523 | gnomAD-4.0.0 | 2.02984E-06 | None | None | None | None | I | None | 3.49443E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9895 | likely_pathogenic | 0.9798 | pathogenic | -0.902 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
R/C | 0.9508 | likely_pathogenic | 0.895 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
R/D | 0.9971 | likely_pathogenic | 0.9944 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
R/E | 0.9868 | likely_pathogenic | 0.975 | pathogenic | 0.063 | Stabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | I |
R/F | 0.9907 | likely_pathogenic | 0.9839 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
R/G | 0.9848 | likely_pathogenic | 0.9679 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.502687105 | None | None | I |
R/H | 0.833 | likely_pathogenic | 0.6994 | pathogenic | -1.724 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
R/I | 0.9738 | likely_pathogenic | 0.9556 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.511113036 | None | None | I |
R/K | 0.756 | likely_pathogenic | 0.6354 | pathogenic | -0.716 | Destabilizing | 0.997 | D | 0.499 | neutral | N | 0.481025746 | None | None | I |
R/L | 0.964 | likely_pathogenic | 0.9342 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
R/M | 0.9889 | likely_pathogenic | 0.9749 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
R/N | 0.9952 | likely_pathogenic | 0.9898 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
R/P | 0.9959 | likely_pathogenic | 0.9937 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
R/Q | 0.8732 | likely_pathogenic | 0.7619 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
R/S | 0.9914 | likely_pathogenic | 0.9819 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.479302329 | None | None | I |
R/T | 0.9865 | likely_pathogenic | 0.971 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.491189038 | None | None | I |
R/V | 0.9753 | likely_pathogenic | 0.9608 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
R/W | 0.9212 | likely_pathogenic | 0.8652 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
R/Y | 0.9776 | likely_pathogenic | 0.9596 | pathogenic | -0.12 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.