Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16431 | 49516;49517;49518 | chr2:178614106;178614105;178614104 | chr2:179478833;179478832;179478831 |
N2AB | 14790 | 44593;44594;44595 | chr2:178614106;178614105;178614104 | chr2:179478833;179478832;179478831 |
N2A | 13863 | 41812;41813;41814 | chr2:178614106;178614105;178614104 | chr2:179478833;179478832;179478831 |
N2B | 7366 | 22321;22322;22323 | chr2:178614106;178614105;178614104 | chr2:179478833;179478832;179478831 |
Novex-1 | 7491 | 22696;22697;22698 | chr2:178614106;178614105;178614104 | chr2:179478833;179478832;179478831 |
Novex-2 | 7558 | 22897;22898;22899 | chr2:178614106;178614105;178614104 | chr2:179478833;179478832;179478831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.689 | 0.348 | 0.417334834585 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/H | None | None | 0.998 | N | 0.463 | 0.376 | 0.342865806769 | gnomAD-4.0.0 | 1.36942E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.1599E-05 | 1.65904E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9577 | likely_pathogenic | 0.9423 | pathogenic | -0.541 | Destabilizing | 0.985 | D | 0.637 | neutral | None | None | None | None | I |
Y/C | 0.6823 | likely_pathogenic | 0.593 | pathogenic | 0.208 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.465795238 | None | None | I |
Y/D | 0.9704 | likely_pathogenic | 0.953 | pathogenic | 0.929 | Stabilizing | 0.998 | D | 0.68 | prob.neutral | N | 0.507369343 | None | None | I |
Y/E | 0.9885 | likely_pathogenic | 0.9833 | pathogenic | 0.903 | Stabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
Y/F | 0.0975 | likely_benign | 0.0963 | benign | -0.298 | Destabilizing | 0.031 | N | 0.224 | neutral | N | 0.460274118 | None | None | I |
Y/G | 0.9701 | likely_pathogenic | 0.9532 | pathogenic | -0.719 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
Y/H | 0.7501 | likely_pathogenic | 0.6614 | pathogenic | 0.27 | Stabilizing | 0.998 | D | 0.463 | neutral | N | 0.469286234 | None | None | I |
Y/I | 0.7521 | likely_pathogenic | 0.7526 | pathogenic | -0.102 | Destabilizing | 0.97 | D | 0.58 | neutral | None | None | None | None | I |
Y/K | 0.9862 | likely_pathogenic | 0.98 | pathogenic | 0.325 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
Y/L | 0.8 | likely_pathogenic | 0.7549 | pathogenic | -0.102 | Destabilizing | 0.871 | D | 0.57 | neutral | None | None | None | None | I |
Y/M | 0.8951 | likely_pathogenic | 0.8687 | pathogenic | 0.011 | Stabilizing | 0.999 | D | 0.572 | neutral | None | None | None | None | I |
Y/N | 0.8372 | likely_pathogenic | 0.7668 | pathogenic | 0.159 | Stabilizing | 0.998 | D | 0.668 | neutral | N | 0.463916374 | None | None | I |
Y/P | 0.9954 | likely_pathogenic | 0.9933 | pathogenic | -0.228 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
Y/Q | 0.973 | likely_pathogenic | 0.9619 | pathogenic | 0.195 | Stabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | I |
Y/R | 0.9624 | likely_pathogenic | 0.9455 | pathogenic | 0.553 | Stabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | I |
Y/S | 0.9168 | likely_pathogenic | 0.8817 | pathogenic | -0.255 | Destabilizing | 0.998 | D | 0.603 | neutral | N | 0.468553738 | None | None | I |
Y/T | 0.9594 | likely_pathogenic | 0.9453 | pathogenic | -0.188 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | I |
Y/V | 0.7146 | likely_pathogenic | 0.6906 | pathogenic | -0.228 | Destabilizing | 0.97 | D | 0.594 | neutral | None | None | None | None | I |
Y/W | 0.662 | likely_pathogenic | 0.6075 | pathogenic | -0.46 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.