Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16433 | 49522;49523;49524 | chr2:178614100;178614099;178614098 | chr2:179478827;179478826;179478825 |
N2AB | 14792 | 44599;44600;44601 | chr2:178614100;178614099;178614098 | chr2:179478827;179478826;179478825 |
N2A | 13865 | 41818;41819;41820 | chr2:178614100;178614099;178614098 | chr2:179478827;179478826;179478825 |
N2B | 7368 | 22327;22328;22329 | chr2:178614100;178614099;178614098 | chr2:179478827;179478826;179478825 |
Novex-1 | 7493 | 22702;22703;22704 | chr2:178614100;178614099;178614098 | chr2:179478827;179478826;179478825 |
Novex-2 | 7560 | 22903;22904;22905 | chr2:178614100;178614099;178614098 | chr2:179478827;179478826;179478825 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.822 | N | 0.599 | 0.214 | 0.569670436194 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2681 | likely_benign | 0.2422 | benign | -1.056 | Destabilizing | 0.822 | D | 0.599 | neutral | N | 0.481119261 | None | None | N |
V/C | 0.788 | likely_pathogenic | 0.7636 | pathogenic | -0.729 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.747 | likely_pathogenic | 0.6755 | pathogenic | -0.875 | Destabilizing | 0.99 | D | 0.819 | deleterious | N | 0.475286505 | None | None | N |
V/E | 0.5599 | ambiguous | 0.4931 | ambiguous | -0.97 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.2689 | likely_benign | 0.245 | benign | -1.117 | Destabilizing | 0.942 | D | 0.774 | deleterious | N | 0.48132334 | None | None | N |
V/G | 0.5118 | ambiguous | 0.4455 | ambiguous | -1.255 | Destabilizing | 0.971 | D | 0.801 | deleterious | N | 0.513289526 | None | None | N |
V/H | 0.7948 | likely_pathogenic | 0.7429 | pathogenic | -0.714 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
V/I | 0.0658 | likely_benign | 0.0678 | benign | -0.655 | Destabilizing | 0.014 | N | 0.258 | neutral | N | 0.443792252 | None | None | N |
V/K | 0.5712 | likely_pathogenic | 0.4936 | ambiguous | -0.773 | Destabilizing | 0.978 | D | 0.805 | deleterious | None | None | None | None | N |
V/L | 0.2849 | likely_benign | 0.2625 | benign | -0.655 | Destabilizing | 0.247 | N | 0.531 | neutral | N | 0.465115061 | None | None | N |
V/M | 0.186 | likely_benign | 0.1829 | benign | -0.427 | Destabilizing | 0.956 | D | 0.781 | deleterious | None | None | None | None | N |
V/N | 0.5248 | ambiguous | 0.4573 | ambiguous | -0.445 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.6941 | likely_pathogenic | 0.6401 | pathogenic | -0.753 | Destabilizing | 0.993 | D | 0.812 | deleterious | None | None | None | None | N |
V/Q | 0.5249 | ambiguous | 0.4687 | ambiguous | -0.761 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | N |
V/R | 0.4975 | ambiguous | 0.4325 | ambiguous | -0.138 | Destabilizing | 0.993 | D | 0.816 | deleterious | None | None | None | None | N |
V/S | 0.4149 | ambiguous | 0.3681 | ambiguous | -0.873 | Destabilizing | 0.978 | D | 0.795 | deleterious | None | None | None | None | N |
V/T | 0.2087 | likely_benign | 0.191 | benign | -0.871 | Destabilizing | 0.86 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/W | 0.8954 | likely_pathogenic | 0.879 | pathogenic | -1.156 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.7245 | likely_pathogenic | 0.6773 | pathogenic | -0.887 | Destabilizing | 0.978 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.