Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16435 | 49528;49529;49530 | chr2:178614094;178614093;178614092 | chr2:179478821;179478820;179478819 |
N2AB | 14794 | 44605;44606;44607 | chr2:178614094;178614093;178614092 | chr2:179478821;179478820;179478819 |
N2A | 13867 | 41824;41825;41826 | chr2:178614094;178614093;178614092 | chr2:179478821;179478820;179478819 |
N2B | 7370 | 22333;22334;22335 | chr2:178614094;178614093;178614092 | chr2:179478821;179478820;179478819 |
Novex-1 | 7495 | 22708;22709;22710 | chr2:178614094;178614093;178614092 | chr2:179478821;179478820;179478819 |
Novex-2 | 7562 | 22909;22910;22911 | chr2:178614094;178614093;178614092 | chr2:179478821;179478820;179478819 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1407270484 | None | 0.906 | N | 0.407 | 0.142 | 0.283371740733 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1407270484 | None | 0.906 | N | 0.407 | 0.142 | 0.283371740733 | gnomAD-4.0.0 | 2.03037E-06 | None | None | None | None | N | None | 0 | 6.16599E-05 | None | 0 | 0 | None | 0 | 0 | 1.20507E-06 | 0 | 0 |
E/K | rs886044255 | None | 0.92 | N | 0.432 | 0.288 | 0.276482976112 | gnomAD-4.0.0 | 3.42356E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2095 | likely_benign | 0.1745 | benign | -0.366 | Destabilizing | 0.061 | N | 0.192 | neutral | N | 0.46839016 | None | None | N |
E/C | 0.8624 | likely_pathogenic | 0.8189 | pathogenic | -0.123 | Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
E/D | 0.0899 | likely_benign | 0.0833 | benign | -0.36 | Destabilizing | 0.906 | D | 0.407 | neutral | N | 0.484201495 | None | None | N |
E/F | 0.7807 | likely_pathogenic | 0.7237 | pathogenic | -0.219 | Destabilizing | 0.997 | D | 0.491 | neutral | None | None | None | None | N |
E/G | 0.3391 | likely_benign | 0.2654 | benign | -0.565 | Destabilizing | 0.852 | D | 0.453 | neutral | D | 0.596234689 | None | None | N |
E/H | 0.6335 | likely_pathogenic | 0.5551 | ambiguous | 0.058 | Stabilizing | 0.997 | D | 0.466 | neutral | None | None | None | None | N |
E/I | 0.3215 | likely_benign | 0.2748 | benign | 0.123 | Stabilizing | 0.982 | D | 0.512 | neutral | None | None | None | None | N |
E/K | 0.2479 | likely_benign | 0.1964 | benign | 0.245 | Stabilizing | 0.92 | D | 0.432 | neutral | N | 0.500683274 | None | None | N |
E/L | 0.3984 | ambiguous | 0.3425 | ambiguous | 0.123 | Stabilizing | 0.939 | D | 0.511 | neutral | None | None | None | None | N |
E/M | 0.4758 | ambiguous | 0.4241 | ambiguous | 0.157 | Stabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | N |
E/N | 0.2648 | likely_benign | 0.2212 | benign | -0.056 | Destabilizing | 0.969 | D | 0.501 | neutral | None | None | None | None | N |
E/P | 0.3747 | ambiguous | 0.3342 | benign | -0.02 | Destabilizing | 0.046 | N | 0.213 | neutral | None | None | None | None | N |
E/Q | 0.215 | likely_benign | 0.1809 | benign | -0.023 | Destabilizing | 0.986 | D | 0.533 | neutral | N | 0.472965374 | None | None | N |
E/R | 0.4689 | ambiguous | 0.3862 | ambiguous | 0.498 | Stabilizing | 0.991 | D | 0.489 | neutral | None | None | None | None | N |
E/S | 0.2511 | likely_benign | 0.2089 | benign | -0.231 | Destabilizing | 0.759 | D | 0.427 | neutral | None | None | None | None | N |
E/T | 0.2783 | likely_benign | 0.2374 | benign | -0.07 | Destabilizing | 0.17 | N | 0.217 | neutral | None | None | None | None | N |
E/V | 0.2141 | likely_benign | 0.1824 | benign | -0.02 | Destabilizing | 0.92 | D | 0.477 | neutral | N | 0.472414888 | None | None | N |
E/W | 0.9439 | likely_pathogenic | 0.9227 | pathogenic | -0.066 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
E/Y | 0.6751 | likely_pathogenic | 0.6006 | pathogenic | 0.023 | Stabilizing | 0.997 | D | 0.486 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.