Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16441 | 49546;49547;49548 | chr2:178614076;178614075;178614074 | chr2:179478803;179478802;179478801 |
N2AB | 14800 | 44623;44624;44625 | chr2:178614076;178614075;178614074 | chr2:179478803;179478802;179478801 |
N2A | 13873 | 41842;41843;41844 | chr2:178614076;178614075;178614074 | chr2:179478803;179478802;179478801 |
N2B | 7376 | 22351;22352;22353 | chr2:178614076;178614075;178614074 | chr2:179478803;179478802;179478801 |
Novex-1 | 7501 | 22726;22727;22728 | chr2:178614076;178614075;178614074 | chr2:179478803;179478802;179478801 |
Novex-2 | 7568 | 22927;22928;22929 | chr2:178614076;178614075;178614074 | chr2:179478803;179478802;179478801 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs570251027 | None | 0.986 | N | 0.651 | 0.371 | 0.570232391912 | gnomAD-4.0.0 | 1.59433E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86241E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0707 | likely_benign | 0.0689 | benign | -0.689 | Destabilizing | 0.908 | D | 0.542 | neutral | N | 0.476585042 | None | None | N |
P/C | 0.4216 | ambiguous | 0.38 | ambiguous | -0.699 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/D | 0.7092 | likely_pathogenic | 0.662 | pathogenic | -0.3 | Destabilizing | 0.989 | D | 0.637 | neutral | None | None | None | None | N |
P/E | 0.4478 | ambiguous | 0.4163 | ambiguous | -0.38 | Destabilizing | 0.989 | D | 0.651 | prob.neutral | None | None | None | None | N |
P/F | 0.6479 | likely_pathogenic | 0.5652 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
P/G | 0.3538 | ambiguous | 0.3209 | benign | -0.877 | Destabilizing | 0.929 | D | 0.633 | neutral | None | None | None | None | N |
P/H | 0.3143 | likely_benign | 0.2756 | benign | -0.33 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/I | 0.3645 | ambiguous | 0.3112 | benign | -0.327 | Destabilizing | 0.995 | D | 0.829 | deleterious | None | None | None | None | N |
P/K | 0.4352 | ambiguous | 0.3797 | ambiguous | -0.584 | Destabilizing | 0.989 | D | 0.647 | neutral | None | None | None | None | N |
P/L | 0.2142 | likely_benign | 0.1778 | benign | -0.327 | Destabilizing | 0.986 | D | 0.651 | prob.neutral | N | 0.496015469 | None | None | N |
P/M | 0.4174 | ambiguous | 0.3603 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/N | 0.4678 | ambiguous | 0.409 | ambiguous | -0.367 | Destabilizing | 0.989 | D | 0.75 | deleterious | None | None | None | None | N |
P/Q | 0.2618 | likely_benign | 0.229 | benign | -0.577 | Destabilizing | 0.993 | D | 0.735 | deleterious | N | 0.468613554 | None | None | N |
P/R | 0.3155 | likely_benign | 0.2697 | benign | -0.059 | Destabilizing | 0.986 | D | 0.779 | deleterious | N | 0.477741333 | None | None | N |
P/S | 0.1372 | likely_benign | 0.127 | benign | -0.798 | Destabilizing | 0.208 | N | 0.374 | neutral | N | 0.461180876 | None | None | N |
P/T | 0.1229 | likely_benign | 0.1102 | benign | -0.77 | Destabilizing | 0.908 | D | 0.632 | neutral | N | 0.47471956 | None | None | N |
P/V | 0.2153 | likely_benign | 0.1848 | benign | -0.411 | Destabilizing | 0.989 | D | 0.735 | deleterious | None | None | None | None | N |
P/W | 0.8374 | likely_pathogenic | 0.787 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
P/Y | 0.6274 | likely_pathogenic | 0.5532 | ambiguous | -0.485 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.