Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16445 | 49558;49559;49560 | chr2:178614064;178614063;178614062 | chr2:179478791;179478790;179478789 |
N2AB | 14804 | 44635;44636;44637 | chr2:178614064;178614063;178614062 | chr2:179478791;179478790;179478789 |
N2A | 13877 | 41854;41855;41856 | chr2:178614064;178614063;178614062 | chr2:179478791;179478790;179478789 |
N2B | 7380 | 22363;22364;22365 | chr2:178614064;178614063;178614062 | chr2:179478791;179478790;179478789 |
Novex-1 | 7505 | 22738;22739;22740 | chr2:178614064;178614063;178614062 | chr2:179478791;179478790;179478789 |
Novex-2 | 7572 | 22939;22940;22941 | chr2:178614064;178614063;178614062 | chr2:179478791;179478790;179478789 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1553701901 | None | 0.919 | N | 0.393 | 0.171 | 0.272205846399 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs1553701901 | None | 0.919 | N | 0.393 | 0.171 | 0.272205846399 | gnomAD-4.0.0 | 2.56791E-06 | None | None | None | None | N | None | 3.38719E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4975 | ambiguous | 0.4559 | ambiguous | -0.349 | Destabilizing | 0.938 | D | 0.455 | neutral | None | None | None | None | N |
K/C | 0.6093 | likely_pathogenic | 0.6266 | pathogenic | -0.302 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
K/D | 0.8405 | likely_pathogenic | 0.7897 | pathogenic | 0.045 | Stabilizing | 0.991 | D | 0.502 | neutral | None | None | None | None | N |
K/E | 0.3415 | ambiguous | 0.3202 | benign | 0.102 | Stabilizing | 0.919 | D | 0.393 | neutral | N | 0.462051366 | None | None | N |
K/F | 0.8715 | likely_pathogenic | 0.8569 | pathogenic | -0.288 | Destabilizing | 0.997 | D | 0.766 | deleterious | None | None | None | None | N |
K/G | 0.6692 | likely_pathogenic | 0.6138 | pathogenic | -0.656 | Destabilizing | 0.968 | D | 0.617 | neutral | None | None | None | None | N |
K/H | 0.3725 | ambiguous | 0.3529 | ambiguous | -1.089 | Destabilizing | 0.997 | D | 0.477 | neutral | None | None | None | None | N |
K/I | 0.4872 | ambiguous | 0.4662 | ambiguous | 0.413 | Stabilizing | 0.996 | D | 0.782 | deleterious | N | 0.520271798 | None | None | N |
K/L | 0.5634 | ambiguous | 0.5266 | ambiguous | 0.413 | Stabilizing | 0.938 | D | 0.617 | neutral | None | None | None | None | N |
K/M | 0.3667 | ambiguous | 0.3491 | ambiguous | 0.393 | Stabilizing | 0.999 | D | 0.48 | neutral | None | None | None | None | N |
K/N | 0.6351 | likely_pathogenic | 0.5846 | pathogenic | -0.067 | Destabilizing | 0.958 | D | 0.476 | neutral | D | 0.627904882 | None | None | N |
K/P | 0.9812 | likely_pathogenic | 0.9642 | pathogenic | 0.19 | Stabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | N |
K/Q | 0.1542 | likely_benign | 0.1522 | benign | -0.238 | Destabilizing | 0.919 | D | 0.506 | neutral | N | 0.466554061 | None | None | N |
K/R | 0.0786 | likely_benign | 0.0793 | benign | -0.382 | Destabilizing | 0.015 | N | 0.13 | neutral | N | 0.45640191 | None | None | N |
K/S | 0.5476 | ambiguous | 0.5165 | ambiguous | -0.695 | Destabilizing | 0.968 | D | 0.392 | neutral | None | None | None | None | N |
K/T | 0.2594 | likely_benign | 0.2434 | benign | -0.452 | Destabilizing | 0.958 | D | 0.531 | neutral | N | 0.466095885 | None | None | N |
K/V | 0.4002 | ambiguous | 0.3825 | ambiguous | 0.19 | Stabilizing | 0.991 | D | 0.595 | neutral | None | None | None | None | N |
K/W | 0.8699 | likely_pathogenic | 0.8472 | pathogenic | -0.18 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
K/Y | 0.7738 | likely_pathogenic | 0.749 | pathogenic | 0.134 | Stabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.