Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1646 | 5161;5162;5163 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
N2AB | 1646 | 5161;5162;5163 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
N2A | 1646 | 5161;5162;5163 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
N2B | 1600 | 5023;5024;5025 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
Novex-1 | 1600 | 5023;5024;5025 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
Novex-2 | 1600 | 5023;5024;5025 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
Novex-3 | 1646 | 5161;5162;5163 | chr2:178776928;178776927;178776926 | chr2:179641655;179641654;179641653 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2092286263 | None | 0.999 | N | 0.584 | 0.372 | 0.44711355012 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85909E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4637 | ambiguous | 0.4134 | ambiguous | -0.637 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/C | 0.6426 | likely_pathogenic | 0.5642 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
N/D | 0.5653 | likely_pathogenic | 0.5406 | ambiguous | -0.924 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.500223409 | None | None | N |
N/E | 0.8517 | likely_pathogenic | 0.8285 | pathogenic | -0.866 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/F | 0.7201 | likely_pathogenic | 0.6863 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
N/G | 0.622 | likely_pathogenic | 0.586 | pathogenic | -0.935 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
N/H | 0.214 | likely_benign | 0.1994 | benign | -0.839 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.512271871 | None | None | N |
N/I | 0.3387 | likely_benign | 0.3139 | benign | 0.101 | Stabilizing | 1.0 | D | 0.819 | deleterious | N | 0.495606551 | None | None | N |
N/K | 0.8018 | likely_pathogenic | 0.7781 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.498942996 | None | None | N |
N/L | 0.4091 | ambiguous | 0.3716 | ambiguous | 0.101 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
N/M | 0.4525 | ambiguous | 0.403 | ambiguous | 0.65 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/P | 0.9772 | likely_pathogenic | 0.9686 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
N/Q | 0.6907 | likely_pathogenic | 0.6473 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/R | 0.7867 | likely_pathogenic | 0.7677 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
N/S | 0.1323 | likely_benign | 0.1286 | benign | -0.771 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.5090233 | None | None | N |
N/T | 0.1973 | likely_benign | 0.179 | benign | -0.546 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.465769479 | None | None | N |
N/V | 0.3715 | ambiguous | 0.3367 | benign | -0.115 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
N/W | 0.9356 | likely_pathogenic | 0.9208 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
N/Y | 0.3938 | ambiguous | 0.3643 | ambiguous | -0.164 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.511406596 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.