Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16462 | 49609;49610;49611 | chr2:178613899;178613898;178613897 | chr2:179478626;179478625;179478624 |
N2AB | 14821 | 44686;44687;44688 | chr2:178613899;178613898;178613897 | chr2:179478626;179478625;179478624 |
N2A | 13894 | 41905;41906;41907 | chr2:178613899;178613898;178613897 | chr2:179478626;179478625;179478624 |
N2B | 7397 | 22414;22415;22416 | chr2:178613899;178613898;178613897 | chr2:179478626;179478625;179478624 |
Novex-1 | 7522 | 22789;22790;22791 | chr2:178613899;178613898;178613897 | chr2:179478626;179478625;179478624 |
Novex-2 | 7589 | 22990;22991;22992 | chr2:178613899;178613898;178613897 | chr2:179478626;179478625;179478624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.02 | N | 0.178 | 0.118 | 0.222439326576 | gnomAD-4.0.0 | 1.59975E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87181E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7268 | likely_pathogenic | 0.6831 | pathogenic | -2.009 | Highly Destabilizing | 0.91 | D | 0.489 | neutral | None | None | None | None | N |
I/C | 0.8058 | likely_pathogenic | 0.7669 | pathogenic | -1.791 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
I/D | 0.9621 | likely_pathogenic | 0.9568 | pathogenic | -1.848 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/E | 0.897 | likely_pathogenic | 0.882 | pathogenic | -1.789 | Destabilizing | 0.993 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/F | 0.4461 | ambiguous | 0.3959 | ambiguous | -1.501 | Destabilizing | 0.991 | D | 0.519 | neutral | D | 0.538977234 | None | None | N |
I/G | 0.944 | likely_pathogenic | 0.9254 | pathogenic | -2.384 | Highly Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/H | 0.8866 | likely_pathogenic | 0.8487 | pathogenic | -1.663 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/K | 0.7617 | likely_pathogenic | 0.7104 | pathogenic | -1.387 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/L | 0.2653 | likely_benign | 0.2491 | benign | -1.011 | Destabilizing | 0.58 | D | 0.305 | neutral | N | 0.480387084 | None | None | N |
I/M | 0.2275 | likely_benign | 0.2031 | benign | -1.039 | Destabilizing | 0.991 | D | 0.519 | neutral | D | 0.564050684 | None | None | N |
I/N | 0.7503 | likely_pathogenic | 0.7154 | pathogenic | -1.378 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | D | 0.595272277 | None | None | N |
I/P | 0.9364 | likely_pathogenic | 0.934 | pathogenic | -1.316 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/Q | 0.8274 | likely_pathogenic | 0.7819 | pathogenic | -1.527 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
I/R | 0.7193 | likely_pathogenic | 0.6651 | pathogenic | -0.891 | Destabilizing | 0.993 | D | 0.714 | prob.delet. | None | None | None | None | N |
I/S | 0.7313 | likely_pathogenic | 0.6897 | pathogenic | -2.071 | Highly Destabilizing | 0.991 | D | 0.604 | neutral | N | 0.478272049 | None | None | N |
I/T | 0.4741 | ambiguous | 0.4316 | ambiguous | -1.884 | Destabilizing | 0.939 | D | 0.512 | neutral | N | 0.481654547 | None | None | N |
I/V | 0.0811 | likely_benign | 0.0776 | benign | -1.316 | Destabilizing | 0.02 | N | 0.178 | neutral | N | 0.428017559 | None | None | N |
I/W | 0.9397 | likely_pathogenic | 0.9292 | pathogenic | -1.606 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/Y | 0.8259 | likely_pathogenic | 0.7819 | pathogenic | -1.341 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.