Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16473 | 49642;49643;49644 | chr2:178613866;178613865;178613864 | chr2:179478593;179478592;179478591 |
N2AB | 14832 | 44719;44720;44721 | chr2:178613866;178613865;178613864 | chr2:179478593;179478592;179478591 |
N2A | 13905 | 41938;41939;41940 | chr2:178613866;178613865;178613864 | chr2:179478593;179478592;179478591 |
N2B | 7408 | 22447;22448;22449 | chr2:178613866;178613865;178613864 | chr2:179478593;179478592;179478591 |
Novex-1 | 7533 | 22822;22823;22824 | chr2:178613866;178613865;178613864 | chr2:179478593;179478592;179478591 |
Novex-2 | 7600 | 23023;23024;23025 | chr2:178613866;178613865;178613864 | chr2:179478593;179478592;179478591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1422077520 | 0.314 | 0.999 | N | 0.599 | 0.459 | 0.37262878642 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1422077520 | 0.314 | 0.999 | N | 0.599 | 0.459 | 0.37262878642 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1422077520 | 0.314 | 0.999 | N | 0.599 | 0.459 | 0.37262878642 | gnomAD-4.0.0 | 2.56785E-06 | None | None | None | None | N | None | 0 | 1.69918E-05 | None | 0 | 0 | None | 0 | 0 | 2.39796E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2415 | likely_benign | 0.2622 | benign | -0.369 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | N | 0.444622992 | None | None | N |
E/C | 0.9012 | likely_pathogenic | 0.9184 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/D | 0.3931 | ambiguous | 0.377 | ambiguous | -1.135 | Destabilizing | 0.999 | D | 0.524 | neutral | N | 0.474985199 | None | None | N |
E/F | 0.8917 | likely_pathogenic | 0.9086 | pathogenic | 0.331 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/G | 0.4402 | ambiguous | 0.4855 | ambiguous | -0.733 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.480829483 | None | None | N |
E/H | 0.7452 | likely_pathogenic | 0.7787 | pathogenic | 0.262 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/I | 0.4675 | ambiguous | 0.5212 | ambiguous | 0.615 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/K | 0.1983 | likely_benign | 0.2683 | benign | -0.329 | Destabilizing | 0.999 | D | 0.599 | neutral | N | 0.448251386 | None | None | N |
E/L | 0.5197 | ambiguous | 0.5412 | ambiguous | 0.615 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/M | 0.6025 | likely_pathogenic | 0.6386 | pathogenic | 0.756 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.6304 | likely_pathogenic | 0.6565 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/P | 0.4279 | ambiguous | 0.4345 | ambiguous | 0.309 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/Q | 0.2055 | likely_benign | 0.2312 | benign | -0.731 | Destabilizing | 1.0 | D | 0.648 | neutral | N | 0.472163366 | None | None | N |
E/R | 0.366 | ambiguous | 0.4432 | ambiguous | 0.045 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/S | 0.4229 | ambiguous | 0.4539 | ambiguous | -1.151 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/T | 0.4207 | ambiguous | 0.4575 | ambiguous | -0.837 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/V | 0.3005 | likely_benign | 0.3505 | ambiguous | 0.309 | Stabilizing | 1.0 | D | 0.783 | deleterious | N | 0.48023221 | None | None | N |
E/W | 0.9758 | likely_pathogenic | 0.9808 | pathogenic | 0.546 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Y | 0.83 | likely_pathogenic | 0.8584 | pathogenic | 0.584 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.