Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16482 | 49669;49670;49671 | chr2:178613839;178613838;178613837 | chr2:179478566;179478565;179478564 |
N2AB | 14841 | 44746;44747;44748 | chr2:178613839;178613838;178613837 | chr2:179478566;179478565;179478564 |
N2A | 13914 | 41965;41966;41967 | chr2:178613839;178613838;178613837 | chr2:179478566;179478565;179478564 |
N2B | 7417 | 22474;22475;22476 | chr2:178613839;178613838;178613837 | chr2:179478566;179478565;179478564 |
Novex-1 | 7542 | 22849;22850;22851 | chr2:178613839;178613838;178613837 | chr2:179478566;179478565;179478564 |
Novex-2 | 7609 | 23050;23051;23052 | chr2:178613839;178613838;178613837 | chr2:179478566;179478565;179478564 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1029563364 | None | 0.993 | N | 0.387 | 0.264 | 0.524792858863 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1029563364 | None | 0.993 | N | 0.387 | 0.264 | 0.524792858863 | gnomAD-4.0.0 | 5.58158E-06 | None | None | None | None | I | None | 0 | 1.66917E-05 | None | 0 | 0 | None | 0 | 0 | 6.7849E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9713 | likely_pathogenic | 0.9649 | pathogenic | -2.323 | Highly Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
I/C | 0.9796 | likely_pathogenic | 0.9731 | pathogenic | -1.434 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
I/D | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.251 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
I/E | 0.9958 | likely_pathogenic | 0.9952 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
I/F | 0.948 | likely_pathogenic | 0.9428 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.713320152 | None | None | I |
I/G | 0.9971 | likely_pathogenic | 0.9966 | pathogenic | -2.742 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
I/H | 0.9972 | likely_pathogenic | 0.9966 | pathogenic | -2.043 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
I/K | 0.991 | likely_pathogenic | 0.9898 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
I/L | 0.522 | ambiguous | 0.4529 | ambiguous | -1.179 | Destabilizing | 0.993 | D | 0.406 | neutral | D | 0.529509263 | None | None | I |
I/M | 0.6913 | likely_pathogenic | 0.6597 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.717483038 | None | None | I |
I/N | 0.9789 | likely_pathogenic | 0.9748 | pathogenic | -1.643 | Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.703371777 | None | None | I |
I/P | 0.9755 | likely_pathogenic | 0.97 | pathogenic | -1.535 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
I/Q | 0.9949 | likely_pathogenic | 0.9936 | pathogenic | -1.753 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
I/R | 0.9889 | likely_pathogenic | 0.9876 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
I/S | 0.9842 | likely_pathogenic | 0.9813 | pathogenic | -2.289 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.738615732 | None | None | I |
I/T | 0.9494 | likely_pathogenic | 0.9438 | pathogenic | -2.087 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.657265295 | None | None | I |
I/V | 0.0742 | likely_benign | 0.0766 | benign | -1.535 | Destabilizing | 0.993 | D | 0.387 | neutral | N | 0.479806484 | None | None | I |
I/W | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -1.848 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
I/Y | 0.994 | likely_pathogenic | 0.9935 | pathogenic | -1.621 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.