Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16489 | 49690;49691;49692 | chr2:178613818;178613817;178613816 | chr2:179478545;179478544;179478543 |
N2AB | 14848 | 44767;44768;44769 | chr2:178613818;178613817;178613816 | chr2:179478545;179478544;179478543 |
N2A | 13921 | 41986;41987;41988 | chr2:178613818;178613817;178613816 | chr2:179478545;179478544;179478543 |
N2B | 7424 | 22495;22496;22497 | chr2:178613818;178613817;178613816 | chr2:179478545;179478544;179478543 |
Novex-1 | 7549 | 22870;22871;22872 | chr2:178613818;178613817;178613816 | chr2:179478545;179478544;179478543 |
Novex-2 | 7616 | 23071;23072;23073 | chr2:178613818;178613817;178613816 | chr2:179478545;179478544;179478543 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs878912537 | None | 0.991 | N | 0.778 | 0.339 | 0.441636318388 | gnomAD-4.0.0 | 3.60099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9392 | likely_pathogenic | 0.9335 | pathogenic | -2.236 | Highly Destabilizing | 0.953 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/C | 0.398 | ambiguous | 0.3647 | ambiguous | -2.235 | Highly Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
R/D | 0.9941 | likely_pathogenic | 0.9935 | pathogenic | -1.702 | Destabilizing | 0.986 | D | 0.742 | deleterious | None | None | None | None | N |
R/E | 0.9364 | likely_pathogenic | 0.9299 | pathogenic | -1.436 | Destabilizing | 0.91 | D | 0.655 | neutral | None | None | None | None | N |
R/F | 0.8619 | likely_pathogenic | 0.8608 | pathogenic | -1.277 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
R/G | 0.9196 | likely_pathogenic | 0.9171 | pathogenic | -2.622 | Highly Destabilizing | 0.939 | D | 0.735 | prob.delet. | N | 0.469108851 | None | None | N |
R/H | 0.3671 | ambiguous | 0.325 | benign | -1.982 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/I | 0.7654 | likely_pathogenic | 0.7739 | pathogenic | -1.09 | Destabilizing | 0.991 | D | 0.778 | deleterious | N | 0.471434387 | None | None | N |
R/K | 0.2132 | likely_benign | 0.1802 | benign | -1.36 | Destabilizing | 0.046 | N | 0.348 | neutral | N | 0.430984709 | None | None | N |
R/L | 0.739 | likely_pathogenic | 0.7025 | pathogenic | -1.09 | Destabilizing | 0.953 | D | 0.735 | prob.delet. | None | None | None | None | N |
R/M | 0.6962 | likely_pathogenic | 0.6496 | pathogenic | -1.557 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
R/N | 0.9742 | likely_pathogenic | 0.9705 | pathogenic | -2.045 | Highly Destabilizing | 0.986 | D | 0.671 | neutral | None | None | None | None | N |
R/P | 0.9983 | likely_pathogenic | 0.9983 | pathogenic | -1.464 | Destabilizing | 0.993 | D | 0.752 | deleterious | None | None | None | None | N |
R/Q | 0.354 | ambiguous | 0.3213 | benign | -1.762 | Destabilizing | 0.986 | D | 0.673 | neutral | None | None | None | None | N |
R/S | 0.9626 | likely_pathogenic | 0.9599 | pathogenic | -2.862 | Highly Destabilizing | 0.939 | D | 0.706 | prob.neutral | N | 0.473328214 | None | None | N |
R/T | 0.9207 | likely_pathogenic | 0.905 | pathogenic | -2.35 | Highly Destabilizing | 0.982 | D | 0.723 | prob.delet. | N | 0.512566976 | None | None | N |
R/V | 0.8173 | likely_pathogenic | 0.8152 | pathogenic | -1.464 | Destabilizing | 0.993 | D | 0.766 | deleterious | None | None | None | None | N |
R/W | 0.5955 | likely_pathogenic | 0.6138 | pathogenic | -0.761 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
R/Y | 0.679 | likely_pathogenic | 0.6631 | pathogenic | -0.711 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.