Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16493 | 49702;49703;49704 | chr2:178613806;178613805;178613804 | chr2:179478533;179478532;179478531 |
N2AB | 14852 | 44779;44780;44781 | chr2:178613806;178613805;178613804 | chr2:179478533;179478532;179478531 |
N2A | 13925 | 41998;41999;42000 | chr2:178613806;178613805;178613804 | chr2:179478533;179478532;179478531 |
N2B | 7428 | 22507;22508;22509 | chr2:178613806;178613805;178613804 | chr2:179478533;179478532;179478531 |
Novex-1 | 7553 | 22882;22883;22884 | chr2:178613806;178613805;178613804 | chr2:179478533;179478532;179478531 |
Novex-2 | 7620 | 23083;23084;23085 | chr2:178613806;178613805;178613804 | chr2:179478533;179478532;179478531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.931 | N | 0.519 | 0.327 | 0.402471007487 | gnomAD-4.0.0 | 1.59363E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86338E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1581 | likely_benign | 0.1353 | benign | -0.01 | Destabilizing | 0.201 | N | 0.452 | neutral | N | 0.472455412 | None | None | N |
D/C | 0.632 | likely_pathogenic | 0.6079 | pathogenic | 0.092 | Stabilizing | 0.982 | D | 0.674 | neutral | None | None | None | None | N |
D/E | 0.1044 | likely_benign | 0.0825 | benign | -0.219 | Destabilizing | 0.001 | N | 0.351 | neutral | N | 0.434359957 | None | None | N |
D/F | 0.6688 | likely_pathogenic | 0.6403 | pathogenic | -0.223 | Destabilizing | 0.982 | D | 0.604 | neutral | None | None | None | None | N |
D/G | 0.2048 | likely_benign | 0.1911 | benign | -0.116 | Destabilizing | 0.334 | N | 0.468 | neutral | N | 0.42937787 | None | None | N |
D/H | 0.3744 | ambiguous | 0.3659 | ambiguous | 0.239 | Stabilizing | 0.931 | D | 0.519 | neutral | N | 0.504753745 | None | None | N |
D/I | 0.3054 | likely_benign | 0.2834 | benign | 0.196 | Stabilizing | 0.826 | D | 0.615 | neutral | None | None | None | None | N |
D/K | 0.3892 | ambiguous | 0.3721 | ambiguous | 0.453 | Stabilizing | 0.25 | N | 0.463 | neutral | None | None | None | None | N |
D/L | 0.3707 | ambiguous | 0.3176 | benign | 0.196 | Stabilizing | 0.7 | D | 0.597 | neutral | None | None | None | None | N |
D/M | 0.5233 | ambiguous | 0.4566 | ambiguous | 0.159 | Stabilizing | 0.982 | D | 0.621 | neutral | None | None | None | None | N |
D/N | 0.1149 | likely_benign | 0.1141 | benign | 0.392 | Stabilizing | 0.638 | D | 0.509 | neutral | N | 0.463750294 | None | None | N |
D/P | 0.8673 | likely_pathogenic | 0.8182 | pathogenic | 0.146 | Stabilizing | 0.826 | D | 0.517 | neutral | None | None | None | None | N |
D/Q | 0.317 | likely_benign | 0.2631 | benign | 0.367 | Stabilizing | 0.539 | D | 0.536 | neutral | None | None | None | None | N |
D/R | 0.5302 | ambiguous | 0.5082 | ambiguous | 0.596 | Stabilizing | 0.539 | D | 0.519 | neutral | None | None | None | None | N |
D/S | 0.1264 | likely_benign | 0.116 | benign | 0.257 | Stabilizing | 0.25 | N | 0.518 | neutral | None | None | None | None | N |
D/T | 0.194 | likely_benign | 0.166 | benign | 0.334 | Stabilizing | 0.7 | D | 0.495 | neutral | None | None | None | None | N |
D/V | 0.1831 | likely_benign | 0.1699 | benign | 0.146 | Stabilizing | 0.638 | D | 0.611 | neutral | N | 0.486463808 | None | None | N |
D/W | 0.9288 | likely_pathogenic | 0.9108 | pathogenic | -0.213 | Destabilizing | 0.982 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/Y | 0.3489 | ambiguous | 0.3565 | ambiguous | -0.007 | Destabilizing | 0.976 | D | 0.604 | neutral | N | 0.472588048 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.