Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16502 | 49729;49730;49731 | chr2:178613779;178613778;178613777 | chr2:179478506;179478505;179478504 |
N2AB | 14861 | 44806;44807;44808 | chr2:178613779;178613778;178613777 | chr2:179478506;179478505;179478504 |
N2A | 13934 | 42025;42026;42027 | chr2:178613779;178613778;178613777 | chr2:179478506;179478505;179478504 |
N2B | 7437 | 22534;22535;22536 | chr2:178613779;178613778;178613777 | chr2:179478506;179478505;179478504 |
Novex-1 | 7562 | 22909;22910;22911 | chr2:178613779;178613778;178613777 | chr2:179478506;179478505;179478504 |
Novex-2 | 7629 | 23110;23111;23112 | chr2:178613779;178613778;178613777 | chr2:179478506;179478505;179478504 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.683 | 0.309 | 0.190952846119 | gnomAD-4.0.0 | 1.59414E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03067E-05 |
K/Q | None | None | 1.0 | N | 0.681 | 0.369 | 0.236278675362 | gnomAD-4.0.0 | 1.59412E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0303E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.963 | likely_pathogenic | 0.8609 | pathogenic | -0.018 | Destabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | I |
K/C | 0.9878 | likely_pathogenic | 0.9441 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/D | 0.9848 | likely_pathogenic | 0.9087 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
K/E | 0.957 | likely_pathogenic | 0.8154 | pathogenic | -0.395 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.471543224 | None | None | I |
K/F | 0.9951 | likely_pathogenic | 0.9749 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
K/G | 0.9714 | likely_pathogenic | 0.8667 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
K/H | 0.8801 | likely_pathogenic | 0.6657 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
K/I | 0.964 | likely_pathogenic | 0.8697 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
K/L | 0.9394 | likely_pathogenic | 0.8256 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
K/M | 0.936 | likely_pathogenic | 0.803 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.613 | neutral | D | 0.542388462 | None | None | I |
K/N | 0.9735 | likely_pathogenic | 0.8788 | pathogenic | -0.104 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.479474991 | None | None | I |
K/P | 0.9479 | likely_pathogenic | 0.8818 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | I |
K/Q | 0.8038 | likely_pathogenic | 0.4951 | ambiguous | -0.24 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.478251846 | None | None | I |
K/R | 0.1725 | likely_benign | 0.0992 | benign | -0.166 | Destabilizing | 0.999 | D | 0.54 | neutral | N | 0.478157631 | None | None | I |
K/S | 0.9751 | likely_pathogenic | 0.8766 | pathogenic | -0.446 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
K/T | 0.9193 | likely_pathogenic | 0.6959 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.449600555 | None | None | I |
K/V | 0.9476 | likely_pathogenic | 0.8247 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
K/W | 0.9915 | likely_pathogenic | 0.9495 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/Y | 0.9815 | likely_pathogenic | 0.9213 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.