Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16503 | 49732;49733;49734 | chr2:178613776;178613775;178613774 | chr2:179478503;179478502;179478501 |
N2AB | 14862 | 44809;44810;44811 | chr2:178613776;178613775;178613774 | chr2:179478503;179478502;179478501 |
N2A | 13935 | 42028;42029;42030 | chr2:178613776;178613775;178613774 | chr2:179478503;179478502;179478501 |
N2B | 7438 | 22537;22538;22539 | chr2:178613776;178613775;178613774 | chr2:179478503;179478502;179478501 |
Novex-1 | 7563 | 22912;22913;22914 | chr2:178613776;178613775;178613774 | chr2:179478503;179478502;179478501 |
Novex-2 | 7630 | 23113;23114;23115 | chr2:178613776;178613775;178613774 | chr2:179478503;179478502;179478501 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.425 | N | 0.317 | 0.267 | 0.662192778189 | gnomAD-4.0.0 | 1.59411E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86431E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7114 | likely_pathogenic | 0.3909 | ambiguous | -0.425 | Destabilizing | 0.495 | N | 0.251 | neutral | None | None | None | None | I |
M/C | 0.9089 | likely_pathogenic | 0.7105 | pathogenic | -0.463 | Destabilizing | 0.981 | D | 0.283 | neutral | None | None | None | None | I |
M/D | 0.9516 | likely_pathogenic | 0.8433 | pathogenic | 0.175 | Stabilizing | 0.981 | D | 0.407 | neutral | None | None | None | None | I |
M/E | 0.8284 | likely_pathogenic | 0.6638 | pathogenic | 0.14 | Stabilizing | 0.936 | D | 0.392 | neutral | None | None | None | None | I |
M/F | 0.4962 | ambiguous | 0.306 | benign | -0.102 | Destabilizing | 0.704 | D | 0.2 | neutral | None | None | None | None | I |
M/G | 0.8931 | likely_pathogenic | 0.6321 | pathogenic | -0.584 | Destabilizing | 0.936 | D | 0.411 | neutral | None | None | None | None | I |
M/H | 0.785 | likely_pathogenic | 0.5269 | ambiguous | 0.266 | Stabilizing | 0.981 | D | 0.275 | neutral | None | None | None | None | I |
M/I | 0.377 | ambiguous | 0.2186 | benign | -0.089 | Destabilizing | 0.001 | N | 0.076 | neutral | N | 0.362367545 | None | None | I |
M/K | 0.5084 | ambiguous | 0.43 | ambiguous | 0.277 | Stabilizing | 0.784 | D | 0.349 | neutral | N | 0.346288546 | None | None | I |
M/L | 0.1471 | likely_benign | 0.1036 | benign | -0.089 | Destabilizing | 0.001 | N | 0.069 | neutral | N | 0.325464705 | None | None | I |
M/N | 0.6924 | likely_pathogenic | 0.3594 | ambiguous | 0.341 | Stabilizing | 0.981 | D | 0.375 | neutral | None | None | None | None | I |
M/P | 0.9791 | likely_pathogenic | 0.9326 | pathogenic | -0.175 | Destabilizing | 0.981 | D | 0.379 | neutral | None | None | None | None | I |
M/Q | 0.4931 | ambiguous | 0.3197 | benign | 0.216 | Stabilizing | 0.981 | D | 0.246 | neutral | None | None | None | None | I |
M/R | 0.5857 | likely_pathogenic | 0.503 | ambiguous | 0.755 | Stabilizing | 0.917 | D | 0.407 | neutral | N | 0.382787247 | None | None | I |
M/S | 0.7028 | likely_pathogenic | 0.3532 | ambiguous | -0.07 | Destabilizing | 0.828 | D | 0.331 | neutral | None | None | None | None | I |
M/T | 0.5436 | ambiguous | 0.237 | benign | -0.008 | Destabilizing | 0.425 | N | 0.317 | neutral | N | 0.312892126 | None | None | I |
M/V | 0.1747 | likely_benign | 0.1135 | benign | -0.175 | Destabilizing | 0.065 | N | 0.191 | neutral | N | 0.329769903 | None | None | I |
M/W | 0.878 | likely_pathogenic | 0.7268 | pathogenic | -0.116 | Destabilizing | 0.995 | D | 0.281 | neutral | None | None | None | None | I |
M/Y | 0.7383 | likely_pathogenic | 0.516 | ambiguous | 0.037 | Stabilizing | 0.981 | D | 0.382 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.