Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16506 | 49741;49742;49743 | chr2:178613767;178613766;178613765 | chr2:179478494;179478493;179478492 |
N2AB | 14865 | 44818;44819;44820 | chr2:178613767;178613766;178613765 | chr2:179478494;179478493;179478492 |
N2A | 13938 | 42037;42038;42039 | chr2:178613767;178613766;178613765 | chr2:179478494;179478493;179478492 |
N2B | 7441 | 22546;22547;22548 | chr2:178613767;178613766;178613765 | chr2:179478494;179478493;179478492 |
Novex-1 | 7566 | 22921;22922;22923 | chr2:178613767;178613766;178613765 | chr2:179478494;179478493;179478492 |
Novex-2 | 7633 | 23122;23123;23124 | chr2:178613767;178613766;178613765 | chr2:179478494;179478493;179478492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1206461113 | 0.197 | 0.001 | N | 0.223 | 0.064 | 0.1749357433 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | I | None | 4.14E-05 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1206461113 | 0.197 | 0.001 | N | 0.223 | 0.064 | 0.1749357433 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1206461113 | 0.197 | 0.001 | N | 0.223 | 0.064 | 0.1749357433 | gnomAD-4.0.0 | 2.56686E-06 | None | None | None | None | I | None | 1.69451E-05 | 1.69589E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5463 | ambiguous | 0.4672 | ambiguous | -0.016 | Destabilizing | 0.157 | N | 0.528 | neutral | None | None | None | None | I |
K/C | 0.8909 | likely_pathogenic | 0.8046 | pathogenic | -0.355 | Destabilizing | 0.909 | D | 0.6 | neutral | None | None | None | None | I |
K/D | 0.7668 | likely_pathogenic | 0.7408 | pathogenic | 0.168 | Stabilizing | 0.567 | D | 0.513 | neutral | None | None | None | None | I |
K/E | 0.3663 | ambiguous | 0.3631 | ambiguous | 0.189 | Stabilizing | 0.124 | N | 0.509 | neutral | N | 0.467264096 | None | None | I |
K/F | 0.9231 | likely_pathogenic | 0.8775 | pathogenic | -0.176 | Destabilizing | 0.726 | D | 0.577 | neutral | None | None | None | None | I |
K/G | 0.6105 | likely_pathogenic | 0.5515 | ambiguous | -0.221 | Destabilizing | 0.272 | N | 0.499 | neutral | None | None | None | None | I |
K/H | 0.5432 | ambiguous | 0.4372 | ambiguous | -0.382 | Destabilizing | 0.909 | D | 0.561 | neutral | None | None | None | None | I |
K/I | 0.6661 | likely_pathogenic | 0.5794 | pathogenic | 0.445 | Stabilizing | 0.396 | N | 0.575 | neutral | None | None | None | None | I |
K/L | 0.575 | likely_pathogenic | 0.5049 | ambiguous | 0.445 | Stabilizing | 0.157 | N | 0.51 | neutral | None | None | None | None | I |
K/M | 0.4658 | ambiguous | 0.4002 | ambiguous | 0.104 | Stabilizing | 0.883 | D | 0.563 | neutral | D | 0.526351785 | None | None | I |
K/N | 0.6263 | likely_pathogenic | 0.5868 | pathogenic | 0.099 | Stabilizing | 0.22 | N | 0.495 | neutral | N | 0.47946017 | None | None | I |
K/P | 0.7343 | likely_pathogenic | 0.6405 | pathogenic | 0.32 | Stabilizing | 0.726 | D | 0.549 | neutral | None | None | None | None | I |
K/Q | 0.2453 | likely_benign | 0.2064 | benign | -0.023 | Destabilizing | 0.009 | N | 0.244 | neutral | N | 0.481576229 | None | None | I |
K/R | 0.1014 | likely_benign | 0.0933 | benign | -0.047 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.470581092 | None | None | I |
K/S | 0.6146 | likely_pathogenic | 0.5396 | ambiguous | -0.403 | Destabilizing | 0.157 | N | 0.485 | neutral | None | None | None | None | I |
K/T | 0.3064 | likely_benign | 0.2557 | benign | -0.227 | Destabilizing | 0.001 | N | 0.273 | neutral | N | 0.467179762 | None | None | I |
K/V | 0.6205 | likely_pathogenic | 0.5047 | ambiguous | 0.32 | Stabilizing | 0.396 | N | 0.491 | neutral | None | None | None | None | I |
K/W | 0.9032 | likely_pathogenic | 0.8452 | pathogenic | -0.199 | Destabilizing | 0.968 | D | 0.643 | neutral | None | None | None | None | I |
K/Y | 0.8471 | likely_pathogenic | 0.7812 | pathogenic | 0.152 | Stabilizing | 0.726 | D | 0.584 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.