Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16507 | 49744;49745;49746 | chr2:178613764;178613763;178613762 | chr2:179478491;179478490;179478489 |
N2AB | 14866 | 44821;44822;44823 | chr2:178613764;178613763;178613762 | chr2:179478491;179478490;179478489 |
N2A | 13939 | 42040;42041;42042 | chr2:178613764;178613763;178613762 | chr2:179478491;179478490;179478489 |
N2B | 7442 | 22549;22550;22551 | chr2:178613764;178613763;178613762 | chr2:179478491;179478490;179478489 |
Novex-1 | 7567 | 22924;22925;22926 | chr2:178613764;178613763;178613762 | chr2:179478491;179478490;179478489 |
Novex-2 | 7634 | 23125;23126;23127 | chr2:178613764;178613763;178613762 | chr2:179478491;179478490;179478489 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.411 | 0.229 | 0.281780670237 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
D/Y | None | None | 1.0 | N | 0.687 | 0.458 | 0.529011059296 | gnomAD-4.0.0 | 6.84825E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00121E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5829 | likely_pathogenic | 0.5039 | ambiguous | 0.009 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.471826134 | None | None | I |
D/C | 0.9507 | likely_pathogenic | 0.8987 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/E | 0.3836 | ambiguous | 0.2385 | benign | -0.242 | Destabilizing | 1.0 | D | 0.411 | neutral | N | 0.469188708 | None | None | I |
D/F | 0.9303 | likely_pathogenic | 0.8965 | pathogenic | 0.337 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
D/G | 0.4412 | ambiguous | 0.3696 | ambiguous | -0.22 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.475241841 | None | None | I |
D/H | 0.8406 | likely_pathogenic | 0.7556 | pathogenic | 0.726 | Stabilizing | 1.0 | D | 0.664 | neutral | N | 0.472738625 | None | None | I |
D/I | 0.8846 | likely_pathogenic | 0.863 | pathogenic | 0.571 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
D/K | 0.8857 | likely_pathogenic | 0.8328 | pathogenic | 0.502 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
D/L | 0.8575 | likely_pathogenic | 0.7988 | pathogenic | 0.571 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
D/M | 0.9322 | likely_pathogenic | 0.8845 | pathogenic | 0.409 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
D/N | 0.3035 | likely_benign | 0.2603 | benign | -0.099 | Destabilizing | 1.0 | D | 0.593 | neutral | N | 0.476482206 | None | None | I |
D/P | 0.9803 | likely_pathogenic | 0.9786 | pathogenic | 0.407 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
D/Q | 0.8286 | likely_pathogenic | 0.7282 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
D/R | 0.9146 | likely_pathogenic | 0.8813 | pathogenic | 0.802 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
D/S | 0.4347 | ambiguous | 0.4004 | ambiguous | -0.167 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
D/T | 0.6577 | likely_pathogenic | 0.5726 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
D/V | 0.7169 | likely_pathogenic | 0.6815 | pathogenic | 0.407 | Stabilizing | 1.0 | D | 0.753 | deleterious | N | 0.482631177 | None | None | I |
D/W | 0.9895 | likely_pathogenic | 0.982 | pathogenic | 0.496 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
D/Y | 0.6834 | likely_pathogenic | 0.608 | pathogenic | 0.604 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.517356552 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.