Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16519 | 49780;49781;49782 | chr2:178613254;178613253;178613252 | chr2:179477981;179477980;179477979 |
N2AB | 14878 | 44857;44858;44859 | chr2:178613254;178613253;178613252 | chr2:179477981;179477980;179477979 |
N2A | 13951 | 42076;42077;42078 | chr2:178613254;178613253;178613252 | chr2:179477981;179477980;179477979 |
N2B | 7454 | 22585;22586;22587 | chr2:178613254;178613253;178613252 | chr2:179477981;179477980;179477979 |
Novex-1 | 7579 | 22960;22961;22962 | chr2:178613254;178613253;178613252 | chr2:179477981;179477980;179477979 |
Novex-2 | 7646 | 23161;23162;23163 | chr2:178613254;178613253;178613252 | chr2:179477981;179477980;179477979 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.996 | N | 0.429 | 0.397 | 0.313518423057 | gnomAD-4.0.0 | 2.7424E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60142E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9002 | likely_pathogenic | 0.8127 | pathogenic | -0.719 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
K/C | 0.9491 | likely_pathogenic | 0.8573 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/D | 0.9664 | likely_pathogenic | 0.9237 | pathogenic | -0.21 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | N |
K/E | 0.7688 | likely_pathogenic | 0.6036 | pathogenic | -0.041 | Destabilizing | 0.996 | D | 0.429 | neutral | N | 0.452270374 | None | None | N |
K/F | 0.9853 | likely_pathogenic | 0.9668 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
K/G | 0.904 | likely_pathogenic | 0.8315 | pathogenic | -1.12 | Destabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
K/H | 0.7221 | likely_pathogenic | 0.5791 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
K/I | 0.8882 | likely_pathogenic | 0.7876 | pathogenic | 0.347 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.482744525 | None | None | N |
K/L | 0.8466 | likely_pathogenic | 0.7414 | pathogenic | 0.347 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
K/M | 0.7249 | likely_pathogenic | 0.5722 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/N | 0.8946 | likely_pathogenic | 0.8015 | pathogenic | -0.713 | Destabilizing | 0.884 | D | 0.255 | neutral | N | 0.468212 | None | None | N |
K/P | 0.9941 | likely_pathogenic | 0.9887 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
K/Q | 0.3882 | ambiguous | 0.2621 | benign | -0.616 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.459507418 | None | None | N |
K/R | 0.1346 | likely_benign | 0.1155 | benign | -0.58 | Destabilizing | 0.998 | D | 0.514 | neutral | N | 0.460414354 | None | None | N |
K/S | 0.9214 | likely_pathogenic | 0.8477 | pathogenic | -1.347 | Destabilizing | 0.997 | D | 0.458 | neutral | None | None | None | None | N |
K/T | 0.7293 | likely_pathogenic | 0.5843 | pathogenic | -0.952 | Destabilizing | 0.999 | D | 0.616 | neutral | N | 0.440200392 | None | None | N |
K/V | 0.8376 | likely_pathogenic | 0.723 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/W | 0.9787 | likely_pathogenic | 0.9496 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/Y | 0.9459 | likely_pathogenic | 0.8868 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.