Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16528 | 49807;49808;49809 | chr2:178613227;178613226;178613225 | chr2:179477954;179477953;179477952 |
N2AB | 14887 | 44884;44885;44886 | chr2:178613227;178613226;178613225 | chr2:179477954;179477953;179477952 |
N2A | 13960 | 42103;42104;42105 | chr2:178613227;178613226;178613225 | chr2:179477954;179477953;179477952 |
N2B | 7463 | 22612;22613;22614 | chr2:178613227;178613226;178613225 | chr2:179477954;179477953;179477952 |
Novex-1 | 7588 | 22987;22988;22989 | chr2:178613227;178613226;178613225 | chr2:179477954;179477953;179477952 |
Novex-2 | 7655 | 23188;23189;23190 | chr2:178613227;178613226;178613225 | chr2:179477954;179477953;179477952 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.485 | 0.396 | 0.349204839081 | gnomAD-4.0.0 | 6.85133E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00126E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8555 | likely_pathogenic | 0.7339 | pathogenic | -1.167 | Destabilizing | 0.999 | D | 0.638 | neutral | N | 0.464062798 | None | None | N |
E/C | 0.99 | likely_pathogenic | 0.9719 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
E/D | 0.9099 | likely_pathogenic | 0.8775 | pathogenic | -1.506 | Destabilizing | 0.999 | D | 0.462 | neutral | D | 0.614839725 | None | None | N |
E/F | 0.995 | likely_pathogenic | 0.9836 | pathogenic | -1.24 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
E/G | 0.925 | likely_pathogenic | 0.8859 | pathogenic | -1.535 | Destabilizing | 1.0 | D | 0.743 | deleterious | D | 0.584425016 | None | None | N |
E/H | 0.9846 | likely_pathogenic | 0.9613 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
E/I | 0.9088 | likely_pathogenic | 0.7197 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
E/K | 0.8895 | likely_pathogenic | 0.7488 | pathogenic | -1.444 | Destabilizing | 0.999 | D | 0.485 | neutral | N | 0.470729637 | None | None | N |
E/L | 0.9634 | likely_pathogenic | 0.8762 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/M | 0.9466 | likely_pathogenic | 0.8191 | pathogenic | 0.471 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
E/N | 0.9722 | likely_pathogenic | 0.9469 | pathogenic | -1.665 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/P | 0.9996 | likely_pathogenic | 0.9992 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/Q | 0.6555 | likely_pathogenic | 0.4704 | ambiguous | -1.41 | Destabilizing | 1.0 | D | 0.587 | neutral | N | 0.475521385 | None | None | N |
E/R | 0.9446 | likely_pathogenic | 0.882 | pathogenic | -1.392 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/S | 0.9089 | likely_pathogenic | 0.8477 | pathogenic | -2.217 | Highly Destabilizing | 0.999 | D | 0.518 | neutral | None | None | None | None | N |
E/T | 0.9191 | likely_pathogenic | 0.8257 | pathogenic | -1.881 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/V | 0.7947 | likely_pathogenic | 0.5381 | ambiguous | -0.468 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.441534686 | None | None | N |
E/W | 0.9985 | likely_pathogenic | 0.9956 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/Y | 0.9926 | likely_pathogenic | 0.9767 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.