Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16535 | 49828;49829;49830 | chr2:178613206;178613205;178613204 | chr2:179477933;179477932;179477931 |
N2AB | 14894 | 44905;44906;44907 | chr2:178613206;178613205;178613204 | chr2:179477933;179477932;179477931 |
N2A | 13967 | 42124;42125;42126 | chr2:178613206;178613205;178613204 | chr2:179477933;179477932;179477931 |
N2B | 7470 | 22633;22634;22635 | chr2:178613206;178613205;178613204 | chr2:179477933;179477932;179477931 |
Novex-1 | 7595 | 23008;23009;23010 | chr2:178613206;178613205;178613204 | chr2:179477933;179477932;179477931 |
Novex-2 | 7662 | 23209;23210;23211 | chr2:178613206;178613205;178613204 | chr2:179477933;179477932;179477931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs975321413 | None | 0.994 | D | 0.732 | 0.541 | 0.629195211289 | gnomAD-4.0.0 | 1.37035E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80024E-06 | 0 | 0 |
K/Q | None | None | 0.988 | N | 0.73 | 0.263 | 0.210429274316 | gnomAD-4.0.0 | 2.0555E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70035E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6985 | likely_pathogenic | 0.4585 | ambiguous | -0.036 | Destabilizing | 0.968 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/C | 0.9067 | likely_pathogenic | 0.798 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
K/D | 0.8907 | likely_pathogenic | 0.7289 | pathogenic | 0.054 | Stabilizing | 0.982 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/E | 0.5513 | ambiguous | 0.33 | benign | 0.079 | Stabilizing | 0.958 | D | 0.631 | neutral | N | 0.416709197 | None | None | I |
K/F | 0.9231 | likely_pathogenic | 0.8112 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
K/G | 0.8258 | likely_pathogenic | 0.6498 | pathogenic | -0.271 | Destabilizing | 0.938 | D | 0.667 | neutral | None | None | None | None | I |
K/H | 0.6184 | likely_pathogenic | 0.4588 | ambiguous | -0.537 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/I | 0.6046 | likely_pathogenic | 0.4075 | ambiguous | 0.512 | Stabilizing | 0.994 | D | 0.732 | prob.delet. | D | 0.54413394 | None | None | I |
K/L | 0.569 | likely_pathogenic | 0.3859 | ambiguous | 0.512 | Stabilizing | 0.995 | D | 0.649 | neutral | None | None | None | None | I |
K/M | 0.5075 | ambiguous | 0.3313 | benign | 0.251 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
K/N | 0.7657 | likely_pathogenic | 0.5567 | ambiguous | 0.162 | Stabilizing | 0.142 | N | 0.368 | neutral | N | 0.472777114 | None | None | I |
K/P | 0.7615 | likely_pathogenic | 0.542 | ambiguous | 0.359 | Stabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | I |
K/Q | 0.3075 | likely_benign | 0.1959 | benign | 0.013 | Stabilizing | 0.988 | D | 0.73 | prob.delet. | N | 0.477575542 | None | None | I |
K/R | 0.1372 | likely_benign | 0.1173 | benign | -0.111 | Destabilizing | 0.958 | D | 0.638 | neutral | N | 0.479757947 | None | None | I |
K/S | 0.7798 | likely_pathogenic | 0.5655 | pathogenic | -0.336 | Destabilizing | 0.938 | D | 0.652 | neutral | None | None | None | None | I |
K/T | 0.5221 | ambiguous | 0.3245 | benign | -0.152 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | N | 0.47865899 | None | None | I |
K/V | 0.5794 | likely_pathogenic | 0.3812 | ambiguous | 0.359 | Stabilizing | 0.995 | D | 0.718 | prob.delet. | None | None | None | None | I |
K/W | 0.9443 | likely_pathogenic | 0.8698 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
K/Y | 0.8538 | likely_pathogenic | 0.7229 | pathogenic | 0.21 | Stabilizing | 0.998 | D | 0.736 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.