Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16536 | 49831;49832;49833 | chr2:178613203;178613202;178613201 | chr2:179477930;179477929;179477928 |
N2AB | 14895 | 44908;44909;44910 | chr2:178613203;178613202;178613201 | chr2:179477930;179477929;179477928 |
N2A | 13968 | 42127;42128;42129 | chr2:178613203;178613202;178613201 | chr2:179477930;179477929;179477928 |
N2B | 7471 | 22636;22637;22638 | chr2:178613203;178613202;178613201 | chr2:179477930;179477929;179477928 |
Novex-1 | 7596 | 23011;23012;23013 | chr2:178613203;178613202;178613201 | chr2:179477930;179477929;179477928 |
Novex-2 | 7663 | 23212;23213;23214 | chr2:178613203;178613202;178613201 | chr2:179477930;179477929;179477928 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.957 | D | 0.707 | 0.387 | 0.264547087235 | gnomAD-4.0.0 | 6.85199E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00121E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1807 | likely_benign | 0.1438 | benign | -1.46 | Destabilizing | 0.039 | N | 0.437 | neutral | N | 0.508400335 | None | None | N |
P/C | 0.8959 | likely_pathogenic | 0.751 | pathogenic | -0.949 | Destabilizing | 0.998 | D | 0.882 | deleterious | None | None | None | None | N |
P/D | 0.9803 | likely_pathogenic | 0.9631 | pathogenic | -1.161 | Destabilizing | 0.992 | D | 0.77 | deleterious | None | None | None | None | N |
P/E | 0.9198 | likely_pathogenic | 0.8801 | pathogenic | -1.209 | Destabilizing | 0.983 | D | 0.754 | deleterious | None | None | None | None | N |
P/F | 0.8946 | likely_pathogenic | 0.7572 | pathogenic | -1.263 | Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
P/G | 0.8608 | likely_pathogenic | 0.7322 | pathogenic | -1.719 | Destabilizing | 0.895 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/H | 0.8378 | likely_pathogenic | 0.6947 | pathogenic | -1.162 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
P/I | 0.849 | likely_pathogenic | 0.7646 | pathogenic | -0.868 | Destabilizing | 0.983 | D | 0.855 | deleterious | None | None | None | None | N |
P/K | 0.9671 | likely_pathogenic | 0.9497 | pathogenic | -1.146 | Destabilizing | 0.983 | D | 0.767 | deleterious | None | None | None | None | N |
P/L | 0.6633 | likely_pathogenic | 0.6025 | pathogenic | -0.868 | Destabilizing | 0.957 | D | 0.771 | deleterious | D | 0.66812914 | None | None | N |
P/M | 0.8559 | likely_pathogenic | 0.7592 | pathogenic | -0.622 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
P/N | 0.9542 | likely_pathogenic | 0.9078 | pathogenic | -0.856 | Destabilizing | 0.992 | D | 0.834 | deleterious | None | None | None | None | N |
P/Q | 0.8327 | likely_pathogenic | 0.7537 | pathogenic | -1.114 | Destabilizing | 0.989 | D | 0.818 | deleterious | D | 0.746024803 | None | None | N |
P/R | 0.9268 | likely_pathogenic | 0.894 | pathogenic | -0.539 | Destabilizing | 0.978 | D | 0.832 | deleterious | D | 0.67191602 | None | None | N |
P/S | 0.6185 | likely_pathogenic | 0.4817 | ambiguous | -1.354 | Destabilizing | 0.957 | D | 0.707 | prob.neutral | D | 0.614827789 | None | None | N |
P/T | 0.6437 | likely_pathogenic | 0.5552 | ambiguous | -1.303 | Destabilizing | 0.978 | D | 0.724 | prob.delet. | D | 0.650238128 | None | None | N |
P/V | 0.7145 | likely_pathogenic | 0.5911 | pathogenic | -1.031 | Destabilizing | 0.968 | D | 0.723 | prob.delet. | None | None | None | None | N |
P/W | 0.9641 | likely_pathogenic | 0.9027 | pathogenic | -1.345 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
P/Y | 0.8928 | likely_pathogenic | 0.7668 | pathogenic | -1.096 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.