Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16551 | 49876;49877;49878 | chr2:178613070;178613069;178613068 | chr2:179477797;179477796;179477795 |
N2AB | 14910 | 44953;44954;44955 | chr2:178613070;178613069;178613068 | chr2:179477797;179477796;179477795 |
N2A | 13983 | 42172;42173;42174 | chr2:178613070;178613069;178613068 | chr2:179477797;179477796;179477795 |
N2B | 7486 | 22681;22682;22683 | chr2:178613070;178613069;178613068 | chr2:179477797;179477796;179477795 |
Novex-1 | 7611 | 23056;23057;23058 | chr2:178613070;178613069;178613068 | chr2:179477797;179477796;179477795 |
Novex-2 | 7678 | 23257;23258;23259 | chr2:178613070;178613069;178613068 | chr2:179477797;179477796;179477795 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1462000296 | -0.167 | 1.0 | N | 0.827 | 0.373 | 0.535152128566 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
P/L | rs1462000296 | -0.167 | 1.0 | N | 0.827 | 0.373 | 0.535152128566 | gnomAD-4.0.0 | 1.59417E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86285E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1824 | likely_benign | 0.19 | benign | -0.622 | Destabilizing | 0.999 | D | 0.771 | deleterious | D | 0.561047806 | None | None | N |
P/C | 0.8349 | likely_pathogenic | 0.8367 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
P/D | 0.9446 | likely_pathogenic | 0.9609 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/E | 0.7721 | likely_pathogenic | 0.8036 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/F | 0.8877 | likely_pathogenic | 0.9109 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/G | 0.8341 | likely_pathogenic | 0.8654 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/H | 0.6295 | likely_pathogenic | 0.704 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.606959467 | None | None | N |
P/I | 0.577 | likely_pathogenic | 0.544 | ambiguous | -0.441 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
P/K | 0.5997 | likely_pathogenic | 0.6746 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
P/L | 0.3179 | likely_benign | 0.352 | ambiguous | -0.441 | Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.451461877 | None | None | N |
P/M | 0.6728 | likely_pathogenic | 0.6716 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/N | 0.8669 | likely_pathogenic | 0.8847 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/Q | 0.5058 | ambiguous | 0.5384 | ambiguous | -0.363 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/R | 0.4738 | ambiguous | 0.5672 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.853 | deleterious | D | 0.562813571 | None | None | N |
P/S | 0.4489 | ambiguous | 0.494 | ambiguous | -0.436 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.566061274 | None | None | N |
P/T | 0.3593 | ambiguous | 0.3524 | ambiguous | -0.464 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.644315625 | None | None | N |
P/V | 0.4451 | ambiguous | 0.4133 | ambiguous | -0.467 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/W | 0.9676 | likely_pathogenic | 0.9784 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
P/Y | 0.8855 | likely_pathogenic | 0.9196 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.