Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16560 | 49903;49904;49905 | chr2:178613043;178613042;178613041 | chr2:179477770;179477769;179477768 |
N2AB | 14919 | 44980;44981;44982 | chr2:178613043;178613042;178613041 | chr2:179477770;179477769;179477768 |
N2A | 13992 | 42199;42200;42201 | chr2:178613043;178613042;178613041 | chr2:179477770;179477769;179477768 |
N2B | 7495 | 22708;22709;22710 | chr2:178613043;178613042;178613041 | chr2:179477770;179477769;179477768 |
Novex-1 | 7620 | 23083;23084;23085 | chr2:178613043;178613042;178613041 | chr2:179477770;179477769;179477768 |
Novex-2 | 7687 | 23284;23285;23286 | chr2:178613043;178613042;178613041 | chr2:179477770;179477769;179477768 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs966629788 | -0.418 | 0.767 | N | 0.286 | 0.178 | 0.438064232554 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/I | rs966629788 | -0.418 | 0.767 | N | 0.286 | 0.178 | 0.438064232554 | gnomAD-4.0.0 | 9.5616E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.60141E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4647 | ambiguous | 0.5125 | ambiguous | -1.508 | Destabilizing | 0.998 | D | 0.58 | neutral | N | 0.48397852 | None | None | N |
V/C | 0.8853 | likely_pathogenic | 0.8709 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/D | 0.9499 | likely_pathogenic | 0.9742 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/E | 0.8729 | likely_pathogenic | 0.9259 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.654247609 | None | None | N |
V/F | 0.494 | ambiguous | 0.5206 | ambiguous | -1.053 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/G | 0.675 | likely_pathogenic | 0.7593 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.652414251 | None | None | N |
V/H | 0.9608 | likely_pathogenic | 0.9714 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.0881 | likely_benign | 0.0787 | benign | -0.595 | Destabilizing | 0.767 | D | 0.286 | neutral | N | 0.487074979 | None | None | N |
V/K | 0.9119 | likely_pathogenic | 0.9475 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/L | 0.3485 | ambiguous | 0.3441 | ambiguous | -0.595 | Destabilizing | 0.981 | D | 0.466 | neutral | N | 0.478329985 | None | None | N |
V/M | 0.3485 | ambiguous | 0.3604 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/N | 0.8876 | likely_pathogenic | 0.9148 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/P | 0.7043 | likely_pathogenic | 0.7213 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.8726 | likely_pathogenic | 0.9115 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/R | 0.8749 | likely_pathogenic | 0.9265 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/S | 0.7241 | likely_pathogenic | 0.7842 | pathogenic | -1.802 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
V/T | 0.5646 | likely_pathogenic | 0.6231 | pathogenic | -1.626 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/W | 0.9657 | likely_pathogenic | 0.9732 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/Y | 0.9075 | likely_pathogenic | 0.9208 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.