Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16570 | 49933;49934;49935 | chr2:178613013;178613012;178613011 | chr2:179477740;179477739;179477738 |
N2AB | 14929 | 45010;45011;45012 | chr2:178613013;178613012;178613011 | chr2:179477740;179477739;179477738 |
N2A | 14002 | 42229;42230;42231 | chr2:178613013;178613012;178613011 | chr2:179477740;179477739;179477738 |
N2B | 7505 | 22738;22739;22740 | chr2:178613013;178613012;178613011 | chr2:179477740;179477739;179477738 |
Novex-1 | 7630 | 23113;23114;23115 | chr2:178613013;178613012;178613011 | chr2:179477740;179477739;179477738 |
Novex-2 | 7697 | 23314;23315;23316 | chr2:178613013;178613012;178613011 | chr2:179477740;179477739;179477738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1345231824 | -2.068 | 1.0 | D | 0.745 | 0.478 | 0.543120768234 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1345231824 | -2.068 | 1.0 | D | 0.745 | 0.478 | 0.543120768234 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs1345231824 | -2.068 | 1.0 | D | 0.745 | 0.478 | 0.543120768234 | gnomAD-4.0.0 | 6.57981E-06 | None | None | None | None | N | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9621 | likely_pathogenic | 0.9701 | pathogenic | -2.783 | Highly Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/C | 0.9345 | likely_pathogenic | 0.936 | pathogenic | -1.919 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9996 | pathogenic | -3.516 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/E | 0.9946 | likely_pathogenic | 0.9972 | pathogenic | -3.183 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/F | 0.7027 | likely_pathogenic | 0.7016 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.713124516 | None | None | N |
L/G | 0.9912 | likely_pathogenic | 0.9941 | pathogenic | -3.405 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/H | 0.9915 | likely_pathogenic | 0.9948 | pathogenic | -3.145 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/I | 0.1862 | likely_benign | 0.1949 | benign | -0.904 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
L/K | 0.9913 | likely_pathogenic | 0.9957 | pathogenic | -2.14 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/M | 0.356 | ambiguous | 0.3671 | ambiguous | -1.057 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.641370572 | None | None | N |
L/N | 0.9961 | likely_pathogenic | 0.9977 | pathogenic | -2.883 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
L/P | 0.9947 | likely_pathogenic | 0.9964 | pathogenic | -1.522 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
L/Q | 0.9845 | likely_pathogenic | 0.9914 | pathogenic | -2.507 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/R | 0.985 | likely_pathogenic | 0.9919 | pathogenic | -2.227 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/S | 0.9959 | likely_pathogenic | 0.9974 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.787153527 | None | None | N |
L/T | 0.977 | likely_pathogenic | 0.9843 | pathogenic | -2.926 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/V | 0.2889 | likely_benign | 0.2928 | benign | -1.522 | Destabilizing | 0.999 | D | 0.585 | neutral | N | 0.505676913 | None | None | N |
L/W | 0.9608 | likely_pathogenic | 0.9751 | pathogenic | -2.102 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.787153527 | None | None | N |
L/Y | 0.9739 | likely_pathogenic | 0.9798 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.