Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16571 | 49936;49937;49938 | chr2:178613010;178613009;178613008 | chr2:179477737;179477736;179477735 |
N2AB | 14930 | 45013;45014;45015 | chr2:178613010;178613009;178613008 | chr2:179477737;179477736;179477735 |
N2A | 14003 | 42232;42233;42234 | chr2:178613010;178613009;178613008 | chr2:179477737;179477736;179477735 |
N2B | 7506 | 22741;22742;22743 | chr2:178613010;178613009;178613008 | chr2:179477737;179477736;179477735 |
Novex-1 | 7631 | 23116;23117;23118 | chr2:178613010;178613009;178613008 | chr2:179477737;179477736;179477735 |
Novex-2 | 7698 | 23317;23318;23319 | chr2:178613010;178613009;178613008 | chr2:179477737;179477736;179477735 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | None | N | 0.277 | 0.091 | 0.0297737177859 | gnomAD-4.0.0 | 1.59337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1633 | likely_benign | 0.1173 | benign | -0.996 | Destabilizing | 0.016 | N | 0.443 | neutral | None | None | None | None | N |
N/C | 0.1945 | likely_benign | 0.1445 | benign | -0.169 | Destabilizing | 0.676 | D | 0.605 | neutral | None | None | None | None | N |
N/D | 0.1529 | likely_benign | 0.1665 | benign | -1.164 | Destabilizing | 0.012 | N | 0.285 | neutral | N | 0.456990228 | None | None | N |
N/E | 0.302 | likely_benign | 0.2884 | benign | -0.991 | Destabilizing | 0.016 | N | 0.267 | neutral | None | None | None | None | N |
N/F | 0.3325 | likely_benign | 0.2236 | benign | -0.491 | Destabilizing | 0.214 | N | 0.6 | neutral | None | None | None | None | N |
N/G | 0.2603 | likely_benign | 0.1947 | benign | -1.397 | Destabilizing | 0.016 | N | 0.274 | neutral | None | None | None | None | N |
N/H | 0.0865 | likely_benign | 0.0764 | benign | -1.007 | Destabilizing | None | N | 0.277 | neutral | N | 0.435566118 | None | None | N |
N/I | 0.1415 | likely_benign | 0.1121 | benign | 0.06 | Stabilizing | 0.029 | N | 0.549 | neutral | N | 0.451021006 | None | None | N |
N/K | 0.375 | ambiguous | 0.3759 | ambiguous | -0.339 | Destabilizing | None | N | 0.156 | neutral | N | 0.349456284 | None | None | N |
N/L | 0.15 | likely_benign | 0.1105 | benign | 0.06 | Stabilizing | 0.016 | N | 0.433 | neutral | None | None | None | None | N |
N/M | 0.2071 | likely_benign | 0.1471 | benign | 0.458 | Stabilizing | 0.003 | N | 0.429 | neutral | None | None | None | None | N |
N/P | 0.8961 | likely_pathogenic | 0.8905 | pathogenic | -0.263 | Destabilizing | 0.072 | N | 0.557 | neutral | None | None | None | None | N |
N/Q | 0.2522 | likely_benign | 0.1989 | benign | -0.924 | Destabilizing | None | N | 0.157 | neutral | None | None | None | None | N |
N/R | 0.3656 | ambiguous | 0.3655 | ambiguous | -0.478 | Destabilizing | 0.038 | N | 0.309 | neutral | None | None | None | None | N |
N/S | 0.0698 | likely_benign | 0.0612 | benign | -1.142 | Destabilizing | None | N | 0.164 | neutral | N | 0.358302894 | None | None | N |
N/T | 0.0791 | likely_benign | 0.0632 | benign | -0.772 | Destabilizing | 0.001 | N | 0.156 | neutral | N | 0.375891316 | None | None | N |
N/V | 0.1562 | likely_benign | 0.1193 | benign | -0.263 | Destabilizing | 0.016 | N | 0.423 | neutral | None | None | None | None | N |
N/W | 0.5794 | likely_pathogenic | 0.5308 | ambiguous | -0.277 | Destabilizing | 0.864 | D | 0.624 | neutral | None | None | None | None | N |
N/Y | 0.133 | likely_benign | 0.1123 | benign | -0.029 | Destabilizing | 0.093 | N | 0.593 | neutral | N | 0.478516327 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.