Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16573 | 49942;49943;49944 | chr2:178613004;178613003;178613002 | chr2:179477731;179477730;179477729 |
N2AB | 14932 | 45019;45020;45021 | chr2:178613004;178613003;178613002 | chr2:179477731;179477730;179477729 |
N2A | 14005 | 42238;42239;42240 | chr2:178613004;178613003;178613002 | chr2:179477731;179477730;179477729 |
N2B | 7508 | 22747;22748;22749 | chr2:178613004;178613003;178613002 | chr2:179477731;179477730;179477729 |
Novex-1 | 7633 | 23122;23123;23124 | chr2:178613004;178613003;178613002 | chr2:179477731;179477730;179477729 |
Novex-2 | 7700 | 23323;23324;23325 | chr2:178613004;178613003;178613002 | chr2:179477731;179477730;179477729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.997 | D | 0.745 | 0.496 | 0.401753679984 | gnomAD-4.0.0 | 1.59337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86187E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1163 | likely_benign | 0.1081 | benign | -0.779 | Destabilizing | 0.76 | D | 0.483 | neutral | N | 0.484846742 | None | None | N |
T/C | 0.5235 | ambiguous | 0.478 | ambiguous | -0.478 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/D | 0.4534 | ambiguous | 0.4998 | ambiguous | -0.134 | Destabilizing | 0.986 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/E | 0.3346 | likely_benign | 0.3924 | ambiguous | -0.122 | Destabilizing | 0.986 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/F | 0.3657 | ambiguous | 0.3709 | ambiguous | -0.824 | Destabilizing | 0.986 | D | 0.769 | deleterious | None | None | None | None | N |
T/G | 0.2551 | likely_benign | 0.2218 | benign | -1.05 | Destabilizing | 0.953 | D | 0.67 | neutral | None | None | None | None | N |
T/H | 0.3282 | likely_benign | 0.3467 | ambiguous | -1.298 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
T/I | 0.2423 | likely_benign | 0.2209 | benign | -0.148 | Destabilizing | 0.964 | D | 0.715 | prob.delet. | N | 0.473495392 | None | None | N |
T/K | 0.2408 | likely_benign | 0.3286 | benign | -0.743 | Destabilizing | 0.982 | D | 0.702 | prob.neutral | N | 0.46905425 | None | None | N |
T/L | 0.1119 | likely_benign | 0.1038 | benign | -0.148 | Destabilizing | 0.06 | N | 0.378 | neutral | None | None | None | None | N |
T/M | 0.1074 | likely_benign | 0.1026 | benign | 0.023 | Stabilizing | 0.986 | D | 0.74 | deleterious | None | None | None | None | N |
T/N | 0.131 | likely_benign | 0.1213 | benign | -0.687 | Destabilizing | 0.986 | D | 0.599 | neutral | None | None | None | None | N |
T/P | 0.2244 | likely_benign | 0.2486 | benign | -0.326 | Destabilizing | 0.997 | D | 0.745 | deleterious | D | 0.564461011 | None | None | N |
T/Q | 0.226 | likely_benign | 0.2459 | benign | -0.78 | Destabilizing | 0.993 | D | 0.745 | deleterious | None | None | None | None | N |
T/R | 0.2143 | likely_benign | 0.3193 | benign | -0.553 | Destabilizing | 0.991 | D | 0.745 | deleterious | N | 0.478021922 | None | None | N |
T/S | 0.135 | likely_benign | 0.116 | benign | -0.958 | Destabilizing | 0.374 | N | 0.409 | neutral | N | 0.467041343 | None | None | N |
T/V | 0.1834 | likely_benign | 0.1594 | benign | -0.326 | Destabilizing | 0.91 | D | 0.473 | neutral | None | None | None | None | N |
T/W | 0.6939 | likely_pathogenic | 0.7451 | pathogenic | -0.795 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
T/Y | 0.4301 | ambiguous | 0.47 | ambiguous | -0.557 | Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.