Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16574 | 49945;49946;49947 | chr2:178613001;178613000;178612999 | chr2:179477728;179477727;179477726 |
N2AB | 14933 | 45022;45023;45024 | chr2:178613001;178613000;178612999 | chr2:179477728;179477727;179477726 |
N2A | 14006 | 42241;42242;42243 | chr2:178613001;178613000;178612999 | chr2:179477728;179477727;179477726 |
N2B | 7509 | 22750;22751;22752 | chr2:178613001;178613000;178612999 | chr2:179477728;179477727;179477726 |
Novex-1 | 7634 | 23125;23126;23127 | chr2:178613001;178613000;178612999 | chr2:179477728;179477727;179477726 |
Novex-2 | 7701 | 23326;23327;23328 | chr2:178613001;178613000;178612999 | chr2:179477728;179477727;179477726 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.718 | 0.286 | 0.134241683229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5555 | ambiguous | 0.6733 | pathogenic | -0.186 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/C | 0.8717 | likely_pathogenic | 0.8936 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
K/D | 0.906 | likely_pathogenic | 0.9506 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
K/E | 0.5024 | ambiguous | 0.6826 | pathogenic | 0.023 | Stabilizing | 0.999 | D | 0.615 | neutral | N | 0.478818169 | None | None | N |
K/F | 0.9214 | likely_pathogenic | 0.951 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
K/G | 0.7835 | likely_pathogenic | 0.8614 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/H | 0.5816 | likely_pathogenic | 0.6431 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/I | 0.5958 | likely_pathogenic | 0.7085 | pathogenic | 0.483 | Stabilizing | 1.0 | D | 0.807 | deleterious | D | 0.573724852 | None | None | N |
K/L | 0.5562 | ambiguous | 0.6519 | pathogenic | 0.483 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/M | 0.4766 | ambiguous | 0.6087 | pathogenic | 0.064 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/N | 0.8314 | likely_pathogenic | 0.9042 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.470145164 | None | None | N |
K/P | 0.5773 | likely_pathogenic | 0.6444 | pathogenic | 0.289 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/Q | 0.2888 | likely_benign | 0.3525 | ambiguous | -0.148 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.481537964 | None | None | N |
K/R | 0.0994 | likely_benign | 0.0994 | benign | -0.212 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.465889309 | None | None | N |
K/S | 0.7518 | likely_pathogenic | 0.8405 | pathogenic | -0.604 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
K/T | 0.4589 | ambiguous | 0.6084 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.475912872 | None | None | N |
K/V | 0.5212 | ambiguous | 0.6166 | pathogenic | 0.289 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/W | 0.9235 | likely_pathogenic | 0.9498 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/Y | 0.8596 | likely_pathogenic | 0.9073 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.