Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16581 | 49966;49967;49968 | chr2:178612980;178612979;178612978 | chr2:179477707;179477706;179477705 |
N2AB | 14940 | 45043;45044;45045 | chr2:178612980;178612979;178612978 | chr2:179477707;179477706;179477705 |
N2A | 14013 | 42262;42263;42264 | chr2:178612980;178612979;178612978 | chr2:179477707;179477706;179477705 |
N2B | 7516 | 22771;22772;22773 | chr2:178612980;178612979;178612978 | chr2:179477707;179477706;179477705 |
Novex-1 | 7641 | 23146;23147;23148 | chr2:178612980;178612979;178612978 | chr2:179477707;179477706;179477705 |
Novex-2 | 7708 | 23347;23348;23349 | chr2:178612980;178612979;178612978 | chr2:179477707;179477706;179477705 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.771 | 0.365 | 0.37953744168 | gnomAD-4.0.0 | 2.73841E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6337 | likely_pathogenic | 0.6045 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
A/D | 0.7069 | likely_pathogenic | 0.8786 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/E | 0.6007 | likely_pathogenic | 0.8063 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.828 | deleterious | N | 0.477302736 | None | None | N |
A/F | 0.6552 | likely_pathogenic | 0.7651 | pathogenic | -1.166 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
A/G | 0.271 | likely_benign | 0.3147 | benign | -0.736 | Destabilizing | 1.0 | D | 0.634 | neutral | N | 0.468623472 | None | None | N |
A/H | 0.7929 | likely_pathogenic | 0.8671 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
A/I | 0.7113 | likely_pathogenic | 0.8262 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/K | 0.8729 | likely_pathogenic | 0.9588 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
A/L | 0.4681 | ambiguous | 0.57 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
A/M | 0.493 | ambiguous | 0.5953 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
A/N | 0.6418 | likely_pathogenic | 0.7503 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
A/P | 0.9819 | likely_pathogenic | 0.9921 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.629800602 | None | None | N |
A/Q | 0.6285 | likely_pathogenic | 0.7518 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/R | 0.7908 | likely_pathogenic | 0.9198 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
A/S | 0.13 | likely_benign | 0.1302 | benign | -0.734 | Destabilizing | 1.0 | D | 0.658 | neutral | N | 0.423726843 | None | None | N |
A/T | 0.242 | likely_benign | 0.3309 | benign | -0.797 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.474075315 | None | None | N |
A/V | 0.4131 | ambiguous | 0.5531 | ambiguous | -0.5 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | N | 0.500683274 | None | None | N |
A/W | 0.922 | likely_pathogenic | 0.9576 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/Y | 0.8013 | likely_pathogenic | 0.8791 | pathogenic | -0.971 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.