Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16583 | 49972;49973;49974 | chr2:178612974;178612973;178612972 | chr2:179477701;179477700;179477699 |
N2AB | 14942 | 45049;45050;45051 | chr2:178612974;178612973;178612972 | chr2:179477701;179477700;179477699 |
N2A | 14015 | 42268;42269;42270 | chr2:178612974;178612973;178612972 | chr2:179477701;179477700;179477699 |
N2B | 7518 | 22777;22778;22779 | chr2:178612974;178612973;178612972 | chr2:179477701;179477700;179477699 |
Novex-1 | 7643 | 23152;23153;23154 | chr2:178612974;178612973;178612972 | chr2:179477701;179477700;179477699 |
Novex-2 | 7710 | 23353;23354;23355 | chr2:178612974;178612973;178612972 | chr2:179477701;179477700;179477699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs372866841 | -2.18 | 0.645 | D | 0.773 | 0.481 | None | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs372866841 | -2.18 | 0.645 | D | 0.773 | 0.481 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs372866841 | -2.18 | 0.645 | D | 0.773 | 0.481 | None | gnomAD-4.0.0 | 6.20118E-06 | None | None | None | None | N | None | 2.6728E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93599E-06 | 1.09827E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8841 | likely_pathogenic | 0.9426 | pathogenic | -2.479 | Highly Destabilizing | 0.547 | D | 0.669 | neutral | None | None | None | None | N |
I/C | 0.9771 | likely_pathogenic | 0.9871 | pathogenic | -1.605 | Destabilizing | 0.985 | D | 0.734 | prob.delet. | None | None | None | None | N |
I/D | 0.9951 | likely_pathogenic | 0.9982 | pathogenic | -2.505 | Highly Destabilizing | 0.945 | D | 0.84 | deleterious | None | None | None | None | N |
I/E | 0.9802 | likely_pathogenic | 0.9926 | pathogenic | -2.403 | Highly Destabilizing | 0.945 | D | 0.835 | deleterious | None | None | None | None | N |
I/F | 0.8289 | likely_pathogenic | 0.9139 | pathogenic | -1.618 | Destabilizing | 0.864 | D | 0.751 | deleterious | D | 0.676033394 | None | None | N |
I/G | 0.9849 | likely_pathogenic | 0.9938 | pathogenic | -2.922 | Highly Destabilizing | 0.945 | D | 0.834 | deleterious | None | None | None | None | N |
I/H | 0.9918 | likely_pathogenic | 0.9969 | pathogenic | -2.215 | Highly Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
I/K | 0.9757 | likely_pathogenic | 0.9914 | pathogenic | -1.907 | Destabilizing | 0.945 | D | 0.833 | deleterious | None | None | None | None | N |
I/L | 0.4034 | ambiguous | 0.4176 | ambiguous | -1.25 | Destabilizing | 0.141 | N | 0.429 | neutral | N | 0.508024661 | None | None | N |
I/M | 0.3687 | ambiguous | 0.4657 | ambiguous | -0.965 | Destabilizing | 0.864 | D | 0.715 | prob.delet. | D | 0.695956131 | None | None | N |
I/N | 0.9398 | likely_pathogenic | 0.9622 | pathogenic | -1.886 | Destabilizing | 0.975 | D | 0.835 | deleterious | D | 0.659865613 | None | None | N |
I/P | 0.9225 | likely_pathogenic | 0.9613 | pathogenic | -1.636 | Destabilizing | 0.981 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9776 | likely_pathogenic | 0.9917 | pathogenic | -1.963 | Destabilizing | 0.981 | D | 0.829 | deleterious | None | None | None | None | N |
I/R | 0.9651 | likely_pathogenic | 0.9882 | pathogenic | -1.335 | Destabilizing | 0.945 | D | 0.834 | deleterious | None | None | None | None | N |
I/S | 0.9379 | likely_pathogenic | 0.9729 | pathogenic | -2.537 | Highly Destabilizing | 0.864 | D | 0.813 | deleterious | D | 0.718884754 | None | None | N |
I/T | 0.6986 | likely_pathogenic | 0.8433 | pathogenic | -2.312 | Highly Destabilizing | 0.645 | D | 0.773 | deleterious | D | 0.649702377 | None | None | N |
I/V | 0.1343 | likely_benign | 0.1404 | benign | -1.636 | Destabilizing | 0.002 | N | 0.238 | neutral | N | 0.483782619 | None | None | N |
I/W | 0.9902 | likely_pathogenic | 0.9966 | pathogenic | -1.864 | Destabilizing | 0.995 | D | 0.746 | deleterious | None | None | None | None | N |
I/Y | 0.9738 | likely_pathogenic | 0.989 | pathogenic | -1.662 | Destabilizing | 0.945 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.