Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16587 | 49984;49985;49986 | chr2:178612962;178612961;178612960 | chr2:179477689;179477688;179477687 |
N2AB | 14946 | 45061;45062;45063 | chr2:178612962;178612961;178612960 | chr2:179477689;179477688;179477687 |
N2A | 14019 | 42280;42281;42282 | chr2:178612962;178612961;178612960 | chr2:179477689;179477688;179477687 |
N2B | 7522 | 22789;22790;22791 | chr2:178612962;178612961;178612960 | chr2:179477689;179477688;179477687 |
Novex-1 | 7647 | 23164;23165;23166 | chr2:178612962;178612961;178612960 | chr2:179477689;179477688;179477687 |
Novex-2 | 7714 | 23365;23366;23367 | chr2:178612962;178612961;178612960 | chr2:179477689;179477688;179477687 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.334 | N | 0.616 | 0.233 | 0.531581166724 | gnomAD-4.0.0 | 1.59351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86172E-06 | 0 | 0 |
V/G | None | None | 0.781 | N | 0.759 | 0.338 | 0.626364337782 | gnomAD-4.0.0 | 1.59351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78909E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4506 | ambiguous | 0.4118 | ambiguous | -2.524 | Highly Destabilizing | 0.334 | N | 0.616 | neutral | N | 0.473466138 | None | None | N |
V/C | 0.7874 | likely_pathogenic | 0.7229 | pathogenic | -2.161 | Highly Destabilizing | 0.982 | D | 0.747 | deleterious | None | None | None | None | N |
V/D | 0.7693 | likely_pathogenic | 0.8128 | pathogenic | -3.366 | Highly Destabilizing | 0.781 | D | 0.801 | deleterious | N | 0.517932922 | None | None | N |
V/E | 0.6263 | likely_pathogenic | 0.6633 | pathogenic | -3.156 | Highly Destabilizing | 0.826 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/F | 0.2864 | likely_benign | 0.2757 | benign | -1.403 | Destabilizing | 0.638 | D | 0.726 | prob.delet. | N | 0.480356617 | None | None | N |
V/G | 0.6085 | likely_pathogenic | 0.6242 | pathogenic | -3.01 | Highly Destabilizing | 0.781 | D | 0.759 | deleterious | N | 0.505940723 | None | None | N |
V/H | 0.7704 | likely_pathogenic | 0.7599 | pathogenic | -2.573 | Highly Destabilizing | 0.982 | D | 0.772 | deleterious | None | None | None | None | N |
V/I | 0.0709 | likely_benign | 0.0596 | benign | -1.152 | Destabilizing | 0.002 | N | 0.243 | neutral | N | 0.402655687 | None | None | N |
V/K | 0.6909 | likely_pathogenic | 0.7254 | pathogenic | -2.131 | Highly Destabilizing | 0.826 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/L | 0.2412 | likely_benign | 0.2156 | benign | -1.152 | Destabilizing | 0.034 | N | 0.515 | neutral | N | 0.475391686 | None | None | N |
V/M | 0.2244 | likely_benign | 0.1877 | benign | -1.401 | Destabilizing | 0.7 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/N | 0.5888 | likely_pathogenic | 0.5594 | ambiguous | -2.483 | Highly Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | N |
V/P | 0.9854 | likely_pathogenic | 0.9896 | pathogenic | -1.588 | Destabilizing | 0.935 | D | 0.782 | deleterious | None | None | None | None | N |
V/Q | 0.6261 | likely_pathogenic | 0.6354 | pathogenic | -2.346 | Highly Destabilizing | 0.935 | D | 0.769 | deleterious | None | None | None | None | N |
V/R | 0.6026 | likely_pathogenic | 0.6579 | pathogenic | -1.845 | Destabilizing | 0.826 | D | 0.799 | deleterious | None | None | None | None | N |
V/S | 0.4914 | ambiguous | 0.4535 | ambiguous | -3.015 | Highly Destabilizing | 0.826 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/T | 0.3567 | ambiguous | 0.2551 | benign | -2.685 | Highly Destabilizing | 0.399 | N | 0.687 | prob.neutral | None | None | None | None | N |
V/W | 0.892 | likely_pathogenic | 0.8844 | pathogenic | -1.883 | Destabilizing | 0.982 | D | 0.759 | deleterious | None | None | None | None | N |
V/Y | 0.6986 | likely_pathogenic | 0.6898 | pathogenic | -1.628 | Destabilizing | 0.826 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.