Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16591 | 49996;49997;49998 | chr2:178612950;178612949;178612948 | chr2:179477677;179477676;179477675 |
N2AB | 14950 | 45073;45074;45075 | chr2:178612950;178612949;178612948 | chr2:179477677;179477676;179477675 |
N2A | 14023 | 42292;42293;42294 | chr2:178612950;178612949;178612948 | chr2:179477677;179477676;179477675 |
N2B | 7526 | 22801;22802;22803 | chr2:178612950;178612949;178612948 | chr2:179477677;179477676;179477675 |
Novex-1 | 7651 | 23176;23177;23178 | chr2:178612950;178612949;178612948 | chr2:179477677;179477676;179477675 |
Novex-2 | 7718 | 23377;23378;23379 | chr2:178612950;178612949;178612948 | chr2:179477677;179477676;179477675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.999 | N | 0.87 | 0.312 | 0.719045985532 | gnomAD-4.0.0 | 1.59354E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78956E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4027 | ambiguous | 0.4443 | ambiguous | -2.116 | Highly Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
L/C | 0.5133 | ambiguous | 0.5046 | ambiguous | -1.377 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/D | 0.9391 | likely_pathogenic | 0.958 | pathogenic | -2.459 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
L/E | 0.4693 | ambiguous | 0.5392 | ambiguous | -2.236 | Highly Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
L/F | 0.2914 | likely_benign | 0.306 | benign | -1.227 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/G | 0.7478 | likely_pathogenic | 0.7895 | pathogenic | -2.635 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/H | 0.3542 | ambiguous | 0.3963 | ambiguous | -2.279 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/I | 0.1983 | likely_benign | 0.2233 | benign | -0.619 | Destabilizing | 1.0 | D | 0.489 | neutral | None | None | None | None | N |
L/K | 0.1928 | likely_benign | 0.2243 | benign | -1.263 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
L/M | 0.1143 | likely_benign | 0.1127 | benign | -0.719 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.470713443 | None | None | N |
L/N | 0.6654 | likely_pathogenic | 0.7036 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/P | 0.9882 | likely_pathogenic | 0.9918 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.893 | deleterious | N | 0.472693421 | None | None | N |
L/Q | 0.0944 | likely_benign | 0.103 | benign | -1.449 | Destabilizing | 0.981 | D | 0.413 | neutral | N | 0.368394292 | None | None | N |
L/R | 0.1619 | likely_benign | 0.1963 | benign | -1.176 | Destabilizing | 0.999 | D | 0.87 | deleterious | N | 0.333479874 | None | None | N |
L/S | 0.5387 | ambiguous | 0.59 | pathogenic | -2.252 | Highly Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
L/T | 0.4788 | ambiguous | 0.534 | ambiguous | -1.891 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/V | 0.1884 | likely_benign | 0.2058 | benign | -1.1 | Destabilizing | 0.998 | D | 0.475 | neutral | N | 0.473894694 | None | None | N |
L/W | 0.4519 | ambiguous | 0.5032 | ambiguous | -1.664 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/Y | 0.516 | ambiguous | 0.5247 | ambiguous | -1.323 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.