Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16596 | 50011;50012;50013 | chr2:178612935;178612934;178612933 | chr2:179477662;179477661;179477660 |
N2AB | 14955 | 45088;45089;45090 | chr2:178612935;178612934;178612933 | chr2:179477662;179477661;179477660 |
N2A | 14028 | 42307;42308;42309 | chr2:178612935;178612934;178612933 | chr2:179477662;179477661;179477660 |
N2B | 7531 | 22816;22817;22818 | chr2:178612935;178612934;178612933 | chr2:179477662;179477661;179477660 |
Novex-1 | 7656 | 23191;23192;23193 | chr2:178612935;178612934;178612933 | chr2:179477662;179477661;179477660 |
Novex-2 | 7723 | 23392;23393;23394 | chr2:178612935;178612934;178612933 | chr2:179477662;179477661;179477660 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs1353241545 | 0.317 | 0.027 | N | 0.319 | 0.145 | 0.270001397563 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/A | rs1353241545 | 0.317 | 0.027 | N | 0.319 | 0.145 | 0.270001397563 | gnomAD-4.0.0 | 1.5935E-06 | None | None | None | None | N | None | 0 | 2.28938E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.137 | likely_benign | 0.1599 | benign | 0.069 | Stabilizing | 0.027 | N | 0.319 | neutral | N | 0.479446478 | None | None | N |
D/C | 0.5935 | likely_pathogenic | 0.6498 | pathogenic | -0.106 | Destabilizing | 0.935 | D | 0.333 | neutral | None | None | None | None | N |
D/E | 0.0765 | likely_benign | 0.0763 | benign | -0.239 | Destabilizing | None | N | 0.114 | neutral | N | 0.43036314 | None | None | N |
D/F | 0.6469 | likely_pathogenic | 0.7106 | pathogenic | -0.05 | Destabilizing | 0.555 | D | 0.343 | neutral | None | None | None | None | N |
D/G | 0.1253 | likely_benign | 0.1531 | benign | -0.037 | Destabilizing | 0.117 | N | 0.373 | neutral | N | 0.442605585 | None | None | N |
D/H | 0.2834 | likely_benign | 0.3515 | ambiguous | 0.553 | Stabilizing | 0.484 | N | 0.371 | neutral | N | 0.467463933 | None | None | N |
D/I | 0.3647 | ambiguous | 0.4291 | ambiguous | 0.278 | Stabilizing | 0.081 | N | 0.329 | neutral | None | None | None | None | N |
D/K | 0.2035 | likely_benign | 0.2751 | benign | 0.435 | Stabilizing | 0.081 | N | 0.353 | neutral | None | None | None | None | N |
D/L | 0.3254 | likely_benign | 0.3846 | ambiguous | 0.278 | Stabilizing | 0.081 | N | 0.327 | neutral | None | None | None | None | N |
D/M | 0.4707 | ambiguous | 0.5233 | ambiguous | 0.065 | Stabilizing | 0.824 | D | 0.337 | neutral | None | None | None | None | N |
D/N | 0.0954 | likely_benign | 0.1064 | benign | 0.275 | Stabilizing | 0.002 | N | 0.316 | neutral | N | 0.469862917 | None | None | N |
D/P | 0.4461 | ambiguous | 0.5264 | ambiguous | 0.227 | Stabilizing | 0.555 | D | 0.373 | neutral | None | None | None | None | N |
D/Q | 0.2077 | likely_benign | 0.251 | benign | 0.267 | Stabilizing | 0.081 | N | 0.323 | neutral | None | None | None | None | N |
D/R | 0.2832 | likely_benign | 0.3848 | ambiguous | 0.658 | Stabilizing | 0.235 | N | 0.341 | neutral | None | None | None | None | N |
D/S | 0.0941 | likely_benign | 0.1066 | benign | 0.152 | Stabilizing | 0.035 | N | 0.318 | neutral | None | None | None | None | N |
D/T | 0.1545 | likely_benign | 0.1748 | benign | 0.239 | Stabilizing | 0.002 | N | 0.363 | neutral | None | None | None | None | N |
D/V | 0.2097 | likely_benign | 0.251 | benign | 0.227 | Stabilizing | 0.002 | N | 0.411 | neutral | N | 0.475119502 | None | None | N |
D/W | 0.8279 | likely_pathogenic | 0.8807 | pathogenic | -0.026 | Destabilizing | 0.935 | D | 0.413 | neutral | None | None | None | None | N |
D/Y | 0.3265 | likely_benign | 0.398 | ambiguous | 0.175 | Stabilizing | 0.741 | D | 0.343 | neutral | N | 0.47141923 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.