Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16599 | 50020;50021;50022 | chr2:178612926;178612925;178612924 | chr2:179477653;179477652;179477651 |
N2AB | 14958 | 45097;45098;45099 | chr2:178612926;178612925;178612924 | chr2:179477653;179477652;179477651 |
N2A | 14031 | 42316;42317;42318 | chr2:178612926;178612925;178612924 | chr2:179477653;179477652;179477651 |
N2B | 7534 | 22825;22826;22827 | chr2:178612926;178612925;178612924 | chr2:179477653;179477652;179477651 |
Novex-1 | 7659 | 23200;23201;23202 | chr2:178612926;178612925;178612924 | chr2:179477653;179477652;179477651 |
Novex-2 | 7726 | 23401;23402;23403 | chr2:178612926;178612925;178612924 | chr2:179477653;179477652;179477651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1553699620 | None | 0.543 | N | 0.25 | 0.123 | 0.448399296293 | gnomAD-4.0.0 | 2.73846E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59921E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3564 | ambiguous | 0.3983 | ambiguous | -1.092 | Destabilizing | 0.994 | D | 0.509 | neutral | N | 0.481010668 | None | None | I |
V/C | 0.7849 | likely_pathogenic | 0.7601 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
V/D | 0.5321 | ambiguous | 0.64 | pathogenic | -1.031 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | N | 0.481498597 | None | None | I |
V/E | 0.3224 | likely_benign | 0.4113 | ambiguous | -1.074 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
V/F | 0.2483 | likely_benign | 0.2662 | benign | -0.921 | Destabilizing | 0.998 | D | 0.667 | neutral | N | 0.474778984 | None | None | I |
V/G | 0.3359 | likely_benign | 0.3775 | ambiguous | -1.34 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.512591686 | None | None | I |
V/H | 0.5966 | likely_pathogenic | 0.6539 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
V/I | 0.0909 | likely_benign | 0.084 | benign | -0.537 | Destabilizing | 0.543 | D | 0.25 | neutral | N | 0.473710026 | None | None | I |
V/K | 0.3755 | ambiguous | 0.4729 | ambiguous | -0.998 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
V/L | 0.2522 | likely_benign | 0.2587 | benign | -0.537 | Destabilizing | 0.948 | D | 0.441 | neutral | N | 0.481324646 | None | None | I |
V/M | 0.2095 | likely_benign | 0.2098 | benign | -0.421 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | I |
V/N | 0.374 | ambiguous | 0.4051 | ambiguous | -0.739 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/P | 0.9459 | likely_pathogenic | 0.962 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
V/Q | 0.3263 | likely_benign | 0.3853 | ambiguous | -0.953 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
V/R | 0.3818 | ambiguous | 0.4771 | ambiguous | -0.405 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/S | 0.3476 | ambiguous | 0.3761 | ambiguous | -1.137 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
V/T | 0.2976 | likely_benign | 0.3222 | benign | -1.082 | Destabilizing | 0.996 | D | 0.581 | neutral | None | None | None | None | I |
V/W | 0.8656 | likely_pathogenic | 0.8894 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
V/Y | 0.6198 | likely_pathogenic | 0.6435 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.