Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16605 | 50038;50039;50040 | chr2:178612908;178612907;178612906 | chr2:179477635;179477634;179477633 |
N2AB | 14964 | 45115;45116;45117 | chr2:178612908;178612907;178612906 | chr2:179477635;179477634;179477633 |
N2A | 14037 | 42334;42335;42336 | chr2:178612908;178612907;178612906 | chr2:179477635;179477634;179477633 |
N2B | 7540 | 22843;22844;22845 | chr2:178612908;178612907;178612906 | chr2:179477635;179477634;179477633 |
Novex-1 | 7665 | 23218;23219;23220 | chr2:178612908;178612907;178612906 | chr2:179477635;179477634;179477633 |
Novex-2 | 7732 | 23419;23420;23421 | chr2:178612908;178612907;178612906 | chr2:179477635;179477634;179477633 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.02 | N | 0.22 | 0.132 | 0.497152477365 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5847 | likely_pathogenic | 0.6322 | pathogenic | -1.761 | Destabilizing | 0.939 | D | 0.519 | neutral | N | 0.463384175 | None | None | N |
V/C | 0.8715 | likely_pathogenic | 0.8558 | pathogenic | -1.224 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
V/D | 0.9098 | likely_pathogenic | 0.9559 | pathogenic | -1.829 | Destabilizing | 0.997 | D | 0.753 | deleterious | N | 0.496625629 | None | None | N |
V/E | 0.8286 | likely_pathogenic | 0.8974 | pathogenic | -1.673 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/F | 0.4177 | ambiguous | 0.485 | ambiguous | -1.092 | Destabilizing | 0.982 | D | 0.687 | prob.neutral | D | 0.525288029 | None | None | N |
V/G | 0.7198 | likely_pathogenic | 0.8215 | pathogenic | -2.254 | Highly Destabilizing | 0.997 | D | 0.755 | deleterious | N | 0.464430381 | None | None | N |
V/H | 0.9323 | likely_pathogenic | 0.9559 | pathogenic | -1.978 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
V/I | 0.0767 | likely_benign | 0.0719 | benign | -0.428 | Destabilizing | 0.02 | N | 0.22 | neutral | N | 0.448122508 | None | None | N |
V/K | 0.8681 | likely_pathogenic | 0.9276 | pathogenic | -1.355 | Destabilizing | 0.993 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/L | 0.3855 | ambiguous | 0.3883 | ambiguous | -0.428 | Destabilizing | 0.76 | D | 0.453 | neutral | N | 0.47742725 | None | None | N |
V/M | 0.3165 | likely_benign | 0.3377 | benign | -0.382 | Destabilizing | 0.986 | D | 0.669 | neutral | None | None | None | None | N |
V/N | 0.7963 | likely_pathogenic | 0.858 | pathogenic | -1.45 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
V/P | 0.9412 | likely_pathogenic | 0.9581 | pathogenic | -0.841 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/Q | 0.8353 | likely_pathogenic | 0.8933 | pathogenic | -1.376 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/R | 0.8566 | likely_pathogenic | 0.9227 | pathogenic | -1.161 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
V/S | 0.6955 | likely_pathogenic | 0.772 | pathogenic | -2.106 | Highly Destabilizing | 0.993 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/T | 0.574 | likely_pathogenic | 0.6324 | pathogenic | -1.807 | Destabilizing | 0.953 | D | 0.629 | neutral | None | None | None | None | N |
V/W | 0.9717 | likely_pathogenic | 0.9806 | pathogenic | -1.519 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/Y | 0.8755 | likely_pathogenic | 0.9106 | pathogenic | -1.126 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.