Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16610 | 50053;50054;50055 | chr2:178612893;178612892;178612891 | chr2:179477620;179477619;179477618 |
N2AB | 14969 | 45130;45131;45132 | chr2:178612893;178612892;178612891 | chr2:179477620;179477619;179477618 |
N2A | 14042 | 42349;42350;42351 | chr2:178612893;178612892;178612891 | chr2:179477620;179477619;179477618 |
N2B | 7545 | 22858;22859;22860 | chr2:178612893;178612892;178612891 | chr2:179477620;179477619;179477618 |
Novex-1 | 7670 | 23233;23234;23235 | chr2:178612893;178612892;178612891 | chr2:179477620;179477619;179477618 |
Novex-2 | 7737 | 23434;23435;23436 | chr2:178612893;178612892;178612891 | chr2:179477620;179477619;179477618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.999 | N | 0.479 | 0.348 | 0.181679512989 | gnomAD-4.0.0 | 3.18759E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 4.83793E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.618 | likely_pathogenic | 0.5679 | pathogenic | -1.784 | Destabilizing | 0.993 | D | 0.533 | neutral | None | None | None | None | N |
H/C | 0.2693 | likely_benign | 0.2123 | benign | -0.868 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
H/D | 0.7955 | likely_pathogenic | 0.8008 | pathogenic | -1.838 | Destabilizing | 0.999 | D | 0.564 | neutral | D | 0.557076379 | None | None | N |
H/E | 0.7189 | likely_pathogenic | 0.7106 | pathogenic | -1.653 | Destabilizing | 0.998 | D | 0.417 | neutral | None | None | None | None | N |
H/F | 0.3199 | likely_benign | 0.2438 | benign | 0.099 | Stabilizing | 0.991 | D | 0.568 | neutral | None | None | None | None | N |
H/G | 0.7495 | likely_pathogenic | 0.7417 | pathogenic | -2.208 | Highly Destabilizing | 0.998 | D | 0.576 | neutral | None | None | None | None | N |
H/I | 0.5382 | ambiguous | 0.4709 | ambiguous | -0.53 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
H/K | 0.6715 | likely_pathogenic | 0.69 | pathogenic | -1.221 | Destabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | N |
H/L | 0.2566 | likely_benign | 0.2262 | benign | -0.53 | Destabilizing | 0.98 | D | 0.653 | neutral | N | 0.464468271 | None | None | N |
H/M | 0.6673 | likely_pathogenic | 0.6197 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
H/N | 0.3711 | ambiguous | 0.3324 | benign | -1.91 | Destabilizing | 0.997 | D | 0.457 | neutral | N | 0.514743532 | None | None | N |
H/P | 0.8971 | likely_pathogenic | 0.9047 | pathogenic | -0.937 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | D | 0.597544745 | None | None | N |
H/Q | 0.482 | ambiguous | 0.4509 | ambiguous | -1.572 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.464823851 | None | None | N |
H/R | 0.4002 | ambiguous | 0.4085 | ambiguous | -1.546 | Destabilizing | 0.999 | D | 0.465 | neutral | N | 0.513937609 | None | None | N |
H/S | 0.5964 | likely_pathogenic | 0.5561 | ambiguous | -1.944 | Destabilizing | 0.993 | D | 0.533 | neutral | None | None | None | None | N |
H/T | 0.618 | likely_pathogenic | 0.5816 | pathogenic | -1.632 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
H/V | 0.4509 | ambiguous | 0.3984 | ambiguous | -0.937 | Destabilizing | 0.996 | D | 0.662 | neutral | None | None | None | None | N |
H/W | 0.5739 | likely_pathogenic | 0.5633 | ambiguous | 0.731 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
H/Y | 0.1003 | likely_benign | 0.0826 | benign | 0.475 | Stabilizing | 0.4 | N | 0.447 | neutral | N | 0.405878206 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.