Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16617 | 50074;50075;50076 | chr2:178612872;178612871;178612870 | chr2:179477599;179477598;179477597 |
N2AB | 14976 | 45151;45152;45153 | chr2:178612872;178612871;178612870 | chr2:179477599;179477598;179477597 |
N2A | 14049 | 42370;42371;42372 | chr2:178612872;178612871;178612870 | chr2:179477599;179477598;179477597 |
N2B | 7552 | 22879;22880;22881 | chr2:178612872;178612871;178612870 | chr2:179477599;179477598;179477597 |
Novex-1 | 7677 | 23254;23255;23256 | chr2:178612872;178612871;178612870 | chr2:179477599;179477598;179477597 |
Novex-2 | 7744 | 23455;23456;23457 | chr2:178612872;178612871;178612870 | chr2:179477599;179477598;179477597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.998 | D | 0.556 | 0.308 | 0.383921772103 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2304 | likely_benign | 0.2585 | benign | -0.456 | Destabilizing | 0.996 | D | 0.502 | neutral | N | 0.501076795 | None | None | N |
E/C | 0.9642 | likely_pathogenic | 0.9695 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/D | 0.321 | likely_benign | 0.2901 | benign | -0.422 | Destabilizing | 0.998 | D | 0.502 | neutral | D | 0.53767553 | None | None | N |
E/F | 0.9556 | likely_pathogenic | 0.9589 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/G | 0.4278 | ambiguous | 0.4766 | ambiguous | -0.676 | Destabilizing | 0.999 | D | 0.525 | neutral | D | 0.611875146 | None | None | N |
E/H | 0.8586 | likely_pathogenic | 0.8794 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
E/I | 0.6975 | likely_pathogenic | 0.7016 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/K | 0.5053 | ambiguous | 0.5663 | pathogenic | 0.22 | Stabilizing | 0.998 | D | 0.556 | neutral | D | 0.535494756 | None | None | N |
E/L | 0.7644 | likely_pathogenic | 0.772 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
E/M | 0.7854 | likely_pathogenic | 0.7974 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
E/N | 0.604 | likely_pathogenic | 0.6097 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
E/P | 0.5425 | ambiguous | 0.5852 | pathogenic | -0.066 | Destabilizing | 0.504 | D | 0.294 | neutral | None | None | None | None | N |
E/Q | 0.3254 | likely_benign | 0.3605 | ambiguous | -0.006 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.474985199 | None | None | N |
E/R | 0.6577 | likely_pathogenic | 0.73 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
E/S | 0.4262 | ambiguous | 0.455 | ambiguous | -0.231 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | N |
E/T | 0.4936 | ambiguous | 0.5291 | ambiguous | -0.055 | Destabilizing | 1.0 | D | 0.537 | neutral | None | None | None | None | N |
E/V | 0.4369 | ambiguous | 0.4582 | ambiguous | -0.066 | Destabilizing | 0.999 | D | 0.56 | neutral | D | 0.546921974 | None | None | N |
E/W | 0.9866 | likely_pathogenic | 0.9897 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Y | 0.9209 | likely_pathogenic | 0.9312 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.