Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16625 | 50098;50099;50100 | chr2:178612848;178612847;178612846 | chr2:179477575;179477574;179477573 |
N2AB | 14984 | 45175;45176;45177 | chr2:178612848;178612847;178612846 | chr2:179477575;179477574;179477573 |
N2A | 14057 | 42394;42395;42396 | chr2:178612848;178612847;178612846 | chr2:179477575;179477574;179477573 |
N2B | 7560 | 22903;22904;22905 | chr2:178612848;178612847;178612846 | chr2:179477575;179477574;179477573 |
Novex-1 | 7685 | 23278;23279;23280 | chr2:178612848;178612847;178612846 | chr2:179477575;179477574;179477573 |
Novex-2 | 7752 | 23479;23480;23481 | chr2:178612848;178612847;178612846 | chr2:179477575;179477574;179477573 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | D | 0.891 | 0.903 | 0.90093157036 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9071 | likely_pathogenic | 0.9229 | pathogenic | -2.627 | Highly Destabilizing | 0.998 | D | 0.678 | prob.neutral | D | 0.74535921 | None | None | N |
V/C | 0.9641 | likely_pathogenic | 0.9672 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/D | 0.9985 | likely_pathogenic | 0.9993 | pathogenic | -3.429 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.816292727 | None | None | N |
V/E | 0.9941 | likely_pathogenic | 0.9968 | pathogenic | -3.132 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/F | 0.9216 | likely_pathogenic | 0.9441 | pathogenic | -1.323 | Destabilizing | 0.999 | D | 0.842 | deleterious | D | 0.815248958 | None | None | N |
V/G | 0.9416 | likely_pathogenic | 0.9637 | pathogenic | -3.181 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.816292727 | None | None | N |
V/H | 0.9987 | likely_pathogenic | 0.9993 | pathogenic | -2.896 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.1132 | likely_benign | 0.104 | benign | -1.003 | Destabilizing | 0.767 | D | 0.333 | neutral | N | 0.52180713 | None | None | N |
V/K | 0.9961 | likely_pathogenic | 0.998 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/L | 0.7347 | likely_pathogenic | 0.7572 | pathogenic | -1.003 | Destabilizing | 0.981 | D | 0.625 | neutral | D | 0.634028452 | None | None | N |
V/M | 0.8305 | likely_pathogenic | 0.8581 | pathogenic | -1.409 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/N | 0.9939 | likely_pathogenic | 0.9966 | pathogenic | -2.641 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9944 | likely_pathogenic | 0.9966 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/Q | 0.9939 | likely_pathogenic | 0.9964 | pathogenic | -2.305 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/R | 0.9917 | likely_pathogenic | 0.9957 | pathogenic | -2.035 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
V/S | 0.9724 | likely_pathogenic | 0.9822 | pathogenic | -3.129 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/T | 0.9376 | likely_pathogenic | 0.9516 | pathogenic | -2.693 | Highly Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/Y | 0.9939 | likely_pathogenic | 0.9962 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.