Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16628 | 50107;50108;50109 | chr2:178612839;178612838;178612837 | chr2:179477566;179477565;179477564 |
N2AB | 14987 | 45184;45185;45186 | chr2:178612839;178612838;178612837 | chr2:179477566;179477565;179477564 |
N2A | 14060 | 42403;42404;42405 | chr2:178612839;178612838;178612837 | chr2:179477566;179477565;179477564 |
N2B | 7563 | 22912;22913;22914 | chr2:178612839;178612838;178612837 | chr2:179477566;179477565;179477564 |
Novex-1 | 7688 | 23287;23288;23289 | chr2:178612839;178612838;178612837 | chr2:179477566;179477565;179477564 |
Novex-2 | 7755 | 23488;23489;23490 | chr2:178612839;178612838;178612837 | chr2:179477566;179477565;179477564 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs764958038 | -2.227 | 0.998 | N | 0.435 | 0.432 | 0.613699239204 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
V/M | None | None | 0.999 | D | 0.679 | 0.361 | 0.589963725375 | gnomAD-4.0.0 | 1.36943E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7997E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3807 | ambiguous | 0.4542 | ambiguous | -1.908 | Destabilizing | 0.998 | D | 0.435 | neutral | N | 0.487762269 | None | None | N |
V/C | 0.7811 | likely_pathogenic | 0.7849 | pathogenic | -1.883 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/D | 0.8155 | likely_pathogenic | 0.9055 | pathogenic | -2.46 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/E | 0.5478 | ambiguous | 0.6445 | pathogenic | -2.377 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.494986477 | None | None | N |
V/F | 0.199 | likely_benign | 0.2564 | benign | -1.378 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
V/G | 0.4884 | ambiguous | 0.6211 | pathogenic | -2.289 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.65470174 | None | None | N |
V/H | 0.7413 | likely_pathogenic | 0.7982 | pathogenic | -1.723 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/I | 0.0765 | likely_benign | 0.0706 | benign | -0.907 | Destabilizing | 0.985 | D | 0.443 | neutral | None | None | None | None | N |
V/K | 0.4721 | ambiguous | 0.5653 | pathogenic | -1.514 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
V/L | 0.2674 | likely_benign | 0.2801 | benign | -0.907 | Destabilizing | 0.434 | N | 0.315 | neutral | D | 0.540432886 | None | None | N |
V/M | 0.1907 | likely_benign | 0.1979 | benign | -1.05 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | D | 0.591555834 | None | None | N |
V/N | 0.6153 | likely_pathogenic | 0.7117 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/P | 0.9884 | likely_pathogenic | 0.9936 | pathogenic | -1.211 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
V/Q | 0.4759 | ambiguous | 0.5245 | ambiguous | -1.732 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.4214 | ambiguous | 0.5234 | ambiguous | -1.082 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/S | 0.4522 | ambiguous | 0.5479 | ambiguous | -2.188 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
V/T | 0.3379 | likely_benign | 0.3815 | ambiguous | -1.988 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
V/W | 0.8697 | likely_pathogenic | 0.9074 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/Y | 0.6587 | likely_pathogenic | 0.7334 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.