Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16635 | 50128;50129;50130 | chr2:178612818;178612817;178612816 | chr2:179477545;179477544;179477543 |
N2AB | 14994 | 45205;45206;45207 | chr2:178612818;178612817;178612816 | chr2:179477545;179477544;179477543 |
N2A | 14067 | 42424;42425;42426 | chr2:178612818;178612817;178612816 | chr2:179477545;179477544;179477543 |
N2B | 7570 | 22933;22934;22935 | chr2:178612818;178612817;178612816 | chr2:179477545;179477544;179477543 |
Novex-1 | 7695 | 23308;23309;23310 | chr2:178612818;178612817;178612816 | chr2:179477545;179477544;179477543 |
Novex-2 | 7762 | 23509;23510;23511 | chr2:178612818;178612817;178612816 | chr2:179477545;179477544;179477543 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.434 | N | 0.272 | 0.15 | 0.185906805712 | gnomAD-4.0.0 | 1.59427E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79408E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2037 | likely_benign | 0.2565 | benign | -0.561 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | N | 0.516640217 | None | None | N |
E/C | 0.9076 | likely_pathogenic | 0.9366 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/D | 0.1115 | likely_benign | 0.1071 | benign | -0.491 | Destabilizing | 0.434 | N | 0.272 | neutral | N | 0.479012032 | None | None | N |
E/F | 0.8212 | likely_pathogenic | 0.8653 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/G | 0.2743 | likely_benign | 0.3767 | ambiguous | -0.77 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.575703182 | None | None | N |
E/H | 0.6769 | likely_pathogenic | 0.7615 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/I | 0.4432 | ambiguous | 0.4998 | ambiguous | -0.036 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/K | 0.2554 | likely_benign | 0.3665 | ambiguous | 0.086 | Stabilizing | 0.998 | D | 0.631 | neutral | N | 0.500461895 | None | None | N |
E/L | 0.4302 | ambiguous | 0.504 | ambiguous | -0.036 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/M | 0.5446 | ambiguous | 0.6209 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/N | 0.3345 | likely_benign | 0.3927 | ambiguous | -0.239 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/P | 0.4901 | ambiguous | 0.5373 | ambiguous | -0.191 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/Q | 0.2323 | likely_benign | 0.293 | benign | -0.207 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.499503292 | None | None | N |
E/R | 0.4474 | ambiguous | 0.5779 | pathogenic | 0.361 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/S | 0.2592 | likely_benign | 0.3168 | benign | -0.415 | Destabilizing | 0.997 | D | 0.655 | neutral | None | None | None | None | N |
E/T | 0.3303 | likely_benign | 0.3995 | ambiguous | -0.247 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/V | 0.28 | likely_benign | 0.3415 | ambiguous | -0.191 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.574383253 | None | None | N |
E/W | 0.9508 | likely_pathogenic | 0.969 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/Y | 0.7368 | likely_pathogenic | 0.802 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.