Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16638 | 50137;50138;50139 | chr2:178612809;178612808;178612807 | chr2:179477536;179477535;179477534 |
N2AB | 14997 | 45214;45215;45216 | chr2:178612809;178612808;178612807 | chr2:179477536;179477535;179477534 |
N2A | 14070 | 42433;42434;42435 | chr2:178612809;178612808;178612807 | chr2:179477536;179477535;179477534 |
N2B | 7573 | 22942;22943;22944 | chr2:178612809;178612808;178612807 | chr2:179477536;179477535;179477534 |
Novex-1 | 7698 | 23317;23318;23319 | chr2:178612809;178612808;178612807 | chr2:179477536;179477535;179477534 |
Novex-2 | 7765 | 23518;23519;23520 | chr2:178612809;178612808;178612807 | chr2:179477536;179477535;179477534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2056589440 | None | 0.997 | N | 0.683 | 0.109 | 0.216624796971 | gnomAD-4.0.0 | 1.36967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79993E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2126 | likely_benign | 0.2517 | benign | -0.448 | Destabilizing | 0.997 | D | 0.812 | deleterious | N | 0.475824495 | None | None | N |
E/C | 0.8997 | likely_pathogenic | 0.931 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.728 | deleterious | None | None | None | None | N |
E/D | 0.0893 | likely_benign | 0.1018 | benign | -0.448 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | N | 0.474441744 | None | None | N |
E/F | 0.7802 | likely_pathogenic | 0.8399 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.72 | deleterious | None | None | None | None | N |
E/G | 0.2834 | likely_benign | 0.3539 | ambiguous | -0.665 | Destabilizing | 0.999 | D | 0.69 | prob.delet. | N | 0.470006594 | None | None | N |
E/H | 0.6369 | likely_pathogenic | 0.7297 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.557 | neutral | None | None | None | None | N |
E/I | 0.3826 | ambiguous | 0.4402 | ambiguous | 0.097 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
E/K | 0.274 | likely_benign | 0.3696 | ambiguous | 0.198 | Stabilizing | 0.997 | D | 0.809 | deleterious | N | 0.475634262 | None | None | N |
E/L | 0.3899 | ambiguous | 0.4533 | ambiguous | 0.097 | Stabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
E/M | 0.5167 | ambiguous | 0.5724 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | N |
E/N | 0.3088 | likely_benign | 0.3883 | ambiguous | -0.237 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | N |
E/P | 0.5038 | ambiguous | 0.5724 | pathogenic | -0.064 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/Q | 0.2304 | likely_benign | 0.2752 | benign | -0.179 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.472831984 | None | None | N |
E/R | 0.4544 | ambiguous | 0.5765 | pathogenic | 0.499 | Stabilizing | 0.999 | D | 0.725 | deleterious | None | None | None | None | N |
E/S | 0.2445 | likely_benign | 0.2988 | benign | -0.389 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
E/T | 0.3046 | likely_benign | 0.365 | ambiguous | -0.207 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
E/V | 0.2481 | likely_benign | 0.2957 | benign | -0.064 | Destabilizing | 0.999 | D | 0.757 | deleterious | N | 0.468553738 | None | None | N |
E/W | 0.9353 | likely_pathogenic | 0.9614 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.727 | deleterious | None | None | None | None | N |
E/Y | 0.6765 | likely_pathogenic | 0.7613 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.