Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16641 | 50146;50147;50148 | chr2:178612800;178612799;178612798 | chr2:179477527;179477526;179477525 |
N2AB | 15000 | 45223;45224;45225 | chr2:178612800;178612799;178612798 | chr2:179477527;179477526;179477525 |
N2A | 14073 | 42442;42443;42444 | chr2:178612800;178612799;178612798 | chr2:179477527;179477526;179477525 |
N2B | 7576 | 22951;22952;22953 | chr2:178612800;178612799;178612798 | chr2:179477527;179477526;179477525 |
Novex-1 | 7701 | 23326;23327;23328 | chr2:178612800;178612799;178612798 | chr2:179477527;179477526;179477525 |
Novex-2 | 7768 | 23527;23528;23529 | chr2:178612800;178612799;178612798 | chr2:179477527;179477526;179477525 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.996 | N | 0.811 | 0.423 | 0.439339381091 | gnomAD-4.0.0 | 1.2004E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2834 | likely_benign | 0.3642 | ambiguous | -0.07 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | N | 0.504864722 | None | None | N |
D/C | 0.8568 | likely_pathogenic | 0.9077 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.73 | deleterious | None | None | None | None | N |
D/E | 0.1897 | likely_benign | 0.197 | benign | -0.18 | Destabilizing | 0.603 | D | 0.249 | neutral | N | 0.423965343 | None | None | N |
D/F | 0.7657 | likely_pathogenic | 0.8447 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.698 | prob.delet. | None | None | None | None | N |
D/G | 0.3795 | ambiguous | 0.494 | ambiguous | -0.212 | Destabilizing | 0.996 | D | 0.811 | deleterious | N | 0.507947474 | None | None | N |
D/H | 0.5489 | ambiguous | 0.69 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.688 | prob.delet. | D | 0.630545705 | None | None | N |
D/I | 0.5095 | ambiguous | 0.6136 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.725 | deleterious | None | None | None | None | N |
D/K | 0.5582 | ambiguous | 0.7115 | pathogenic | 0.555 | Stabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
D/L | 0.4849 | ambiguous | 0.5919 | pathogenic | 0.24 | Stabilizing | 0.999 | D | 0.707 | prob.delet. | None | None | None | None | N |
D/M | 0.7589 | likely_pathogenic | 0.8162 | pathogenic | 0.309 | Stabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | N |
D/N | 0.1737 | likely_benign | 0.2251 | benign | 0.349 | Stabilizing | 0.999 | D | 0.783 | deleterious | N | 0.507026414 | None | None | N |
D/P | 0.6144 | likely_pathogenic | 0.6889 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
D/Q | 0.5035 | ambiguous | 0.6155 | pathogenic | 0.36 | Stabilizing | 0.998 | D | 0.735 | deleterious | None | None | None | None | N |
D/R | 0.6595 | likely_pathogenic | 0.7983 | pathogenic | 0.62 | Stabilizing | 0.998 | D | 0.694 | prob.delet. | None | None | None | None | N |
D/S | 0.1928 | likely_benign | 0.2557 | benign | 0.263 | Stabilizing | 0.993 | D | 0.756 | deleterious | None | None | None | None | N |
D/T | 0.3909 | ambiguous | 0.4677 | ambiguous | 0.375 | Stabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
D/V | 0.3346 | likely_benign | 0.435 | ambiguous | 0.157 | Stabilizing | 0.999 | D | 0.725 | deleterious | N | 0.508387648 | None | None | N |
D/W | 0.9613 | likely_pathogenic | 0.9781 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.669 | prob.neutral | None | None | None | None | N |
D/Y | 0.4653 | ambiguous | 0.6014 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.699 | prob.delet. | D | 0.670339108 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.