Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16642 | 50149;50150;50151 | chr2:178612797;178612796;178612795 | chr2:179477524;179477523;179477522 |
N2AB | 15001 | 45226;45227;45228 | chr2:178612797;178612796;178612795 | chr2:179477524;179477523;179477522 |
N2A | 14074 | 42445;42446;42447 | chr2:178612797;178612796;178612795 | chr2:179477524;179477523;179477522 |
N2B | 7577 | 22954;22955;22956 | chr2:178612797;178612796;178612795 | chr2:179477524;179477523;179477522 |
Novex-1 | 7702 | 23329;23330;23331 | chr2:178612797;178612796;178612795 | chr2:179477524;179477523;179477522 |
Novex-2 | 7769 | 23530;23531;23532 | chr2:178612797;178612796;178612795 | chr2:179477524;179477523;179477522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2056587744 | None | 0.518 | D | 0.722 | 0.326 | 0.66200615542 | gnomAD-4.0.0 | 1.59546E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86402E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1053 | likely_benign | 0.1253 | benign | -0.495 | Destabilizing | 0.518 | D | 0.525 | neutral | N | 0.50415067 | None | None | N |
P/C | 0.7468 | likely_pathogenic | 0.8041 | pathogenic | -0.562 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
P/D | 0.7121 | likely_pathogenic | 0.8127 | pathogenic | -0.359 | Destabilizing | 0.909 | D | 0.627 | neutral | None | None | None | None | N |
P/E | 0.5055 | ambiguous | 0.6207 | pathogenic | -0.485 | Destabilizing | 0.909 | D | 0.638 | neutral | None | None | None | None | N |
P/F | 0.7115 | likely_pathogenic | 0.8231 | pathogenic | -0.805 | Destabilizing | 0.02 | N | 0.546 | neutral | None | None | None | None | N |
P/G | 0.5427 | ambiguous | 0.6344 | pathogenic | -0.622 | Destabilizing | 0.587 | D | 0.649 | prob.neutral | None | None | None | None | N |
P/H | 0.3236 | likely_benign | 0.4579 | ambiguous | -0.241 | Destabilizing | 0.983 | D | 0.771 | deleterious | D | 0.652520172 | None | None | N |
P/I | 0.4319 | ambiguous | 0.5146 | ambiguous | -0.315 | Destabilizing | 0.909 | D | 0.841 | deleterious | None | None | None | None | N |
P/K | 0.4167 | ambiguous | 0.5473 | ambiguous | -0.382 | Destabilizing | 0.833 | D | 0.632 | neutral | None | None | None | None | N |
P/L | 0.2087 | likely_benign | 0.285 | benign | -0.315 | Destabilizing | 0.518 | D | 0.722 | deleterious | D | 0.550940718 | None | None | N |
P/M | 0.4907 | ambiguous | 0.5723 | pathogenic | -0.245 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
P/N | 0.5816 | likely_pathogenic | 0.6689 | pathogenic | -0.094 | Destabilizing | 0.833 | D | 0.837 | deleterious | None | None | None | None | N |
P/Q | 0.2998 | likely_benign | 0.3891 | ambiguous | -0.38 | Destabilizing | 0.909 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/R | 0.2488 | likely_benign | 0.393 | ambiguous | 0.159 | Stabilizing | 0.883 | D | 0.829 | deleterious | D | 0.527116637 | None | None | N |
P/S | 0.2266 | likely_benign | 0.292 | benign | -0.449 | Destabilizing | 0.062 | N | 0.362 | neutral | N | 0.503451938 | None | None | N |
P/T | 0.1571 | likely_benign | 0.2064 | benign | -0.476 | Destabilizing | 0.518 | D | 0.653 | prob.neutral | D | 0.558456859 | None | None | N |
P/V | 0.2866 | likely_benign | 0.3421 | ambiguous | -0.339 | Destabilizing | 0.909 | D | 0.636 | neutral | None | None | None | None | N |
P/W | 0.88 | likely_pathogenic | 0.9419 | pathogenic | -0.874 | Destabilizing | 0.996 | D | 0.763 | deleterious | None | None | None | None | N |
P/Y | 0.7105 | likely_pathogenic | 0.8234 | pathogenic | -0.558 | Destabilizing | 0.833 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.