Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16659 | 50200;50201;50202 | chr2:178612550;178612549;178612548 | chr2:179477277;179477276;179477275 |
N2AB | 15018 | 45277;45278;45279 | chr2:178612550;178612549;178612548 | chr2:179477277;179477276;179477275 |
N2A | 14091 | 42496;42497;42498 | chr2:178612550;178612549;178612548 | chr2:179477277;179477276;179477275 |
N2B | 7594 | 23005;23006;23007 | chr2:178612550;178612549;178612548 | chr2:179477277;179477276;179477275 |
Novex-1 | 7719 | 23380;23381;23382 | chr2:178612550;178612549;178612548 | chr2:179477277;179477276;179477275 |
Novex-2 | 7786 | 23581;23582;23583 | chr2:178612550;178612549;178612548 | chr2:179477277;179477276;179477275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs778767799 | 0.158 | 0.98 | N | 0.551 | 0.301 | 0.250039746154 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.25E-06 | 0 |
E/K | rs778767799 | 0.158 | 0.98 | N | 0.551 | 0.301 | 0.250039746154 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.45E-05 | 0 | 0 | 0 | 0 |
E/K | rs778767799 | 0.158 | 0.98 | N | 0.551 | 0.301 | 0.250039746154 | gnomAD-4.0.0 | 6.4271E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.58519E-05 | 0 | 9.59168E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5689 | likely_pathogenic | 0.6925 | pathogenic | -0.52 | Destabilizing | 0.98 | D | 0.604 | neutral | N | 0.471622492 | None | None | N |
E/C | 0.9788 | likely_pathogenic | 0.9883 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/D | 0.503 | ambiguous | 0.4497 | ambiguous | -0.793 | Destabilizing | 0.031 | N | 0.19 | neutral | N | 0.480954813 | None | None | N |
E/F | 0.9811 | likely_pathogenic | 0.9906 | pathogenic | 0.179 | Stabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
E/G | 0.7489 | likely_pathogenic | 0.8368 | pathogenic | -0.869 | Destabilizing | 0.98 | D | 0.665 | neutral | N | 0.514536692 | None | None | N |
E/H | 0.8702 | likely_pathogenic | 0.9342 | pathogenic | 0.155 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
E/I | 0.8577 | likely_pathogenic | 0.9127 | pathogenic | 0.423 | Stabilizing | 0.983 | D | 0.772 | deleterious | None | None | None | None | N |
E/K | 0.6271 | likely_pathogenic | 0.7992 | pathogenic | -0.158 | Destabilizing | 0.98 | D | 0.551 | neutral | N | 0.435153728 | None | None | N |
E/L | 0.8656 | likely_pathogenic | 0.9148 | pathogenic | 0.423 | Stabilizing | 0.191 | N | 0.471 | neutral | None | None | None | None | N |
E/M | 0.8616 | likely_pathogenic | 0.9185 | pathogenic | 0.576 | Stabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
E/N | 0.7978 | likely_pathogenic | 0.8481 | pathogenic | -0.835 | Destabilizing | 0.991 | D | 0.559 | neutral | None | None | None | None | N |
E/P | 0.997 | likely_pathogenic | 0.9978 | pathogenic | 0.131 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/Q | 0.3895 | ambiguous | 0.5264 | ambiguous | -0.677 | Destabilizing | 0.994 | D | 0.565 | neutral | N | 0.476988018 | None | None | N |
E/R | 0.747 | likely_pathogenic | 0.8712 | pathogenic | 0.188 | Stabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | N |
E/S | 0.6399 | likely_pathogenic | 0.7405 | pathogenic | -1.051 | Destabilizing | 0.97 | D | 0.537 | neutral | None | None | None | None | N |
E/T | 0.643 | likely_pathogenic | 0.7641 | pathogenic | -0.752 | Destabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
E/V | 0.65 | likely_pathogenic | 0.7628 | pathogenic | 0.131 | Stabilizing | 0.925 | D | 0.661 | neutral | N | 0.474410184 | None | None | N |
E/W | 0.9921 | likely_pathogenic | 0.9967 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Y | 0.9562 | likely_pathogenic | 0.9777 | pathogenic | 0.449 | Stabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.