Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16670 | 50233;50234;50235 | chr2:178612517;178612516;178612515 | chr2:179477244;179477243;179477242 |
N2AB | 15029 | 45310;45311;45312 | chr2:178612517;178612516;178612515 | chr2:179477244;179477243;179477242 |
N2A | 14102 | 42529;42530;42531 | chr2:178612517;178612516;178612515 | chr2:179477244;179477243;179477242 |
N2B | 7605 | 23038;23039;23040 | chr2:178612517;178612516;178612515 | chr2:179477244;179477243;179477242 |
Novex-1 | 7730 | 23413;23414;23415 | chr2:178612517;178612516;178612515 | chr2:179477244;179477243;179477242 |
Novex-2 | 7797 | 23614;23615;23616 | chr2:178612517;178612516;178612515 | chr2:179477244;179477243;179477242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.556 | 0.312 | 0.307332253619 | gnomAD-4.0.0 | 1.59526E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9853 | likely_pathogenic | 0.9914 | pathogenic | -2.714 | Highly Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/C | 0.9743 | likely_pathogenic | 0.9783 | pathogenic | -1.87 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9999 | pathogenic | -3.459 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9986 | likely_pathogenic | 0.9994 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/F | 0.8873 | likely_pathogenic | 0.9299 | pathogenic | -1.636 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
L/G | 0.9977 | likely_pathogenic | 0.9989 | pathogenic | -3.337 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/H | 0.9983 | likely_pathogenic | 0.9993 | pathogenic | -3.08 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/I | 0.2221 | likely_benign | 0.2494 | benign | -0.844 | Destabilizing | 0.999 | D | 0.556 | neutral | N | 0.518014734 | None | None | N |
L/K | 0.9974 | likely_pathogenic | 0.9989 | pathogenic | -2.132 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/M | 0.5464 | ambiguous | 0.595 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/N | 0.9989 | likely_pathogenic | 0.9996 | pathogenic | -2.847 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
L/P | 0.9993 | likely_pathogenic | 0.9998 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.799569317 | None | None | N |
L/Q | 0.9968 | likely_pathogenic | 0.9987 | pathogenic | -2.487 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.799569317 | None | None | N |
L/R | 0.9953 | likely_pathogenic | 0.998 | pathogenic | -2.175 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.799569317 | None | None | N |
L/S | 0.9988 | likely_pathogenic | 0.9995 | pathogenic | -3.415 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/T | 0.9881 | likely_pathogenic | 0.9941 | pathogenic | -2.921 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.3491 | ambiguous | 0.3704 | ambiguous | -1.457 | Destabilizing | 0.999 | D | 0.568 | neutral | D | 0.529888999 | None | None | N |
L/W | 0.9953 | likely_pathogenic | 0.9982 | pathogenic | -2.111 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/Y | 0.9952 | likely_pathogenic | 0.9977 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.