Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16678 | 50257;50258;50259 | chr2:178612493;178612492;178612491 | chr2:179477220;179477219;179477218 |
N2AB | 15037 | 45334;45335;45336 | chr2:178612493;178612492;178612491 | chr2:179477220;179477219;179477218 |
N2A | 14110 | 42553;42554;42555 | chr2:178612493;178612492;178612491 | chr2:179477220;179477219;179477218 |
N2B | 7613 | 23062;23063;23064 | chr2:178612493;178612492;178612491 | chr2:179477220;179477219;179477218 |
Novex-1 | 7738 | 23437;23438;23439 | chr2:178612493;178612492;178612491 | chr2:179477220;179477219;179477218 |
Novex-2 | 7805 | 23638;23639;23640 | chr2:178612493;178612492;178612491 | chr2:179477220;179477219;179477218 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs774889204 | -0.658 | 1.0 | D | 0.451 | 0.334 | 0.291694819147 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.69E-05 | None | 0 | None | 0 | 0 | 0 |
D/G | None | None | 1.0 | D | 0.717 | 0.563 | 0.443797312901 | gnomAD-4.0.0 | 1.5948E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7441 | likely_pathogenic | 0.9048 | pathogenic | -0.499 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.571539672 | None | None | I |
D/C | 0.9668 | likely_pathogenic | 0.9883 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
D/E | 0.7095 | likely_pathogenic | 0.8199 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.451 | neutral | D | 0.585648467 | None | None | I |
D/F | 0.957 | likely_pathogenic | 0.9826 | pathogenic | -0.525 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
D/G | 0.6946 | likely_pathogenic | 0.8709 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.664375827 | None | None | I |
D/H | 0.8444 | likely_pathogenic | 0.9352 | pathogenic | -0.852 | Destabilizing | 1.0 | D | 0.653 | neutral | D | 0.634504008 | None | None | I |
D/I | 0.9308 | likely_pathogenic | 0.9815 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
D/K | 0.9392 | likely_pathogenic | 0.9814 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
D/L | 0.9286 | likely_pathogenic | 0.973 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
D/M | 0.9722 | likely_pathogenic | 0.9899 | pathogenic | 0.619 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
D/N | 0.308 | likely_benign | 0.4806 | ambiguous | -0.327 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.484018218 | None | None | I |
D/P | 0.9193 | likely_pathogenic | 0.9691 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
D/Q | 0.9179 | likely_pathogenic | 0.9712 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
D/R | 0.9447 | likely_pathogenic | 0.9839 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
D/S | 0.5238 | ambiguous | 0.7422 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
D/T | 0.7494 | likely_pathogenic | 0.8769 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
D/V | 0.8373 | likely_pathogenic | 0.9485 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.639697688 | None | None | I |
D/W | 0.9898 | likely_pathogenic | 0.996 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
D/Y | 0.7421 | likely_pathogenic | 0.8947 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.631 | neutral | D | 0.702119904 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.