Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16686 | 50281;50282;50283 | chr2:178612469;178612468;178612467 | chr2:179477196;179477195;179477194 |
N2AB | 15045 | 45358;45359;45360 | chr2:178612469;178612468;178612467 | chr2:179477196;179477195;179477194 |
N2A | 14118 | 42577;42578;42579 | chr2:178612469;178612468;178612467 | chr2:179477196;179477195;179477194 |
N2B | 7621 | 23086;23087;23088 | chr2:178612469;178612468;178612467 | chr2:179477196;179477195;179477194 |
Novex-1 | 7746 | 23461;23462;23463 | chr2:178612469;178612468;178612467 | chr2:179477196;179477195;179477194 |
Novex-2 | 7813 | 23662;23663;23664 | chr2:178612469;178612468;178612467 | chr2:179477196;179477195;179477194 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2056512518 | -2.208 | 1.0 | D | 0.887 | 0.962 | 0.897505141811 | Peled (2013) | None | RCM | het | None | None | N | Segregation analysis in single RCM family, co-segregates with phenotype (n = 5, 5 affected (total 13)) | None | None | None | None | None | None | None | None | None | None | None |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9984 | likely_pathogenic | 0.9992 | pathogenic | -3.693 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Y/C | 0.9745 | likely_pathogenic | 0.9853 | pathogenic | -2.147 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.837928079 | None | None | N |
Y/D | 0.9983 | likely_pathogenic | 0.9994 | pathogenic | -3.998 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | D | 0.837555981 | None | None | N |
Y/E | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | -3.785 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Y/F | 0.4012 | ambiguous | 0.4421 | ambiguous | -1.526 | Destabilizing | 0.999 | D | 0.63 | neutral | D | 0.593177948 | None | None | N |
Y/G | 0.9942 | likely_pathogenic | 0.9969 | pathogenic | -4.097 | Highly Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
Y/H | 0.9912 | likely_pathogenic | 0.9959 | pathogenic | -2.761 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.785571782 | None | None | N |
Y/I | 0.985 | likely_pathogenic | 0.9892 | pathogenic | -2.319 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/K | 0.9994 | likely_pathogenic | 0.9997 | pathogenic | -2.638 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/L | 0.9576 | likely_pathogenic | 0.9681 | pathogenic | -2.319 | Highly Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
Y/M | 0.9924 | likely_pathogenic | 0.9953 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/N | 0.9905 | likely_pathogenic | 0.996 | pathogenic | -3.436 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.837928079 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -2.798 | Highly Destabilizing | 1.0 | D | 0.949 | deleterious | None | None | None | None | N |
Y/Q | 0.9994 | likely_pathogenic | 0.9997 | pathogenic | -3.177 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Y/R | 0.9972 | likely_pathogenic | 0.9984 | pathogenic | -2.353 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/S | 0.9942 | likely_pathogenic | 0.9974 | pathogenic | -3.743 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.837928079 | None | None | N |
Y/T | 0.997 | likely_pathogenic | 0.9986 | pathogenic | -3.413 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Y/V | 0.9736 | likely_pathogenic | 0.9807 | pathogenic | -2.798 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Y/W | 0.9158 | likely_pathogenic | 0.9294 | pathogenic | -0.767 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.