Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16696 | 50311;50312;50313 | chr2:178612439;178612438;178612437 | chr2:179477166;179477165;179477164 |
N2AB | 15055 | 45388;45389;45390 | chr2:178612439;178612438;178612437 | chr2:179477166;179477165;179477164 |
N2A | 14128 | 42607;42608;42609 | chr2:178612439;178612438;178612437 | chr2:179477166;179477165;179477164 |
N2B | 7631 | 23116;23117;23118 | chr2:178612439;178612438;178612437 | chr2:179477166;179477165;179477164 |
Novex-1 | 7756 | 23491;23492;23493 | chr2:178612439;178612438;178612437 | chr2:179477166;179477165;179477164 |
Novex-2 | 7823 | 23692;23693;23694 | chr2:178612439;178612438;178612437 | chr2:179477166;179477165;179477164 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs745412383 | 0.215 | 1.0 | N | 0.657 | 0.276 | 0.207176502487 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9E-06 | 0 |
K/N | rs745412383 | 0.215 | 1.0 | N | 0.657 | 0.276 | 0.207176502487 | gnomAD-4.0.0 | 1.59406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86234E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9023 | likely_pathogenic | 0.9289 | pathogenic | -0.122 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
K/C | 0.9768 | likely_pathogenic | 0.9806 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
K/D | 0.9534 | likely_pathogenic | 0.973 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
K/E | 0.8593 | likely_pathogenic | 0.9244 | pathogenic | -0.457 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.474728982 | None | None | N |
K/F | 0.986 | likely_pathogenic | 0.99 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/G | 0.871 | likely_pathogenic | 0.9011 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/H | 0.7735 | likely_pathogenic | 0.8163 | pathogenic | -0.249 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/I | 0.9325 | likely_pathogenic | 0.9543 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | D | 0.532352098 | None | None | N |
K/L | 0.8869 | likely_pathogenic | 0.9071 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/M | 0.8561 | likely_pathogenic | 0.8899 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/N | 0.917 | likely_pathogenic | 0.9421 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.477141792 | None | None | N |
K/P | 0.9037 | likely_pathogenic | 0.9369 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
K/Q | 0.5825 | likely_pathogenic | 0.6709 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.648 | neutral | N | 0.468758841 | None | None | N |
K/R | 0.1524 | likely_benign | 0.1444 | benign | -0.278 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.477881434 | None | None | N |
K/S | 0.9182 | likely_pathogenic | 0.9434 | pathogenic | -0.56 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
K/T | 0.7848 | likely_pathogenic | 0.8443 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.478251311 | None | None | N |
K/V | 0.9068 | likely_pathogenic | 0.9297 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
K/W | 0.9749 | likely_pathogenic | 0.9841 | pathogenic | -0.629 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
K/Y | 0.9619 | likely_pathogenic | 0.9702 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.