Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16699 | 50320;50321;50322 | chr2:178612430;178612429;178612428 | chr2:179477157;179477156;179477155 |
N2AB | 15058 | 45397;45398;45399 | chr2:178612430;178612429;178612428 | chr2:179477157;179477156;179477155 |
N2A | 14131 | 42616;42617;42618 | chr2:178612430;178612429;178612428 | chr2:179477157;179477156;179477155 |
N2B | 7634 | 23125;23126;23127 | chr2:178612430;178612429;178612428 | chr2:179477157;179477156;179477155 |
Novex-1 | 7759 | 23500;23501;23502 | chr2:178612430;178612429;178612428 | chr2:179477157;179477156;179477155 |
Novex-2 | 7826 | 23701;23702;23703 | chr2:178612430;178612429;178612428 | chr2:179477157;179477156;179477155 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.997 | N | 0.583 | 0.443 | 0.194818534648 | gnomAD-4.0.0 | 1.59381E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86198E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.5152 | ambiguous | 0.4693 | ambiguous | -0.61 | Destabilizing | 0.997 | D | 0.551 | neutral | None | None | None | None | N |
Q/C | 0.9614 | likely_pathogenic | 0.9564 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
Q/D | 0.883 | likely_pathogenic | 0.9429 | pathogenic | -0.231 | Destabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | N |
Q/E | 0.2861 | likely_benign | 0.4057 | ambiguous | -0.135 | Destabilizing | 0.992 | D | 0.455 | neutral | N | 0.483220737 | None | None | N |
Q/F | 0.9268 | likely_pathogenic | 0.9301 | pathogenic | -0.258 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Q/G | 0.7633 | likely_pathogenic | 0.7855 | pathogenic | -0.96 | Destabilizing | 0.997 | D | 0.576 | neutral | None | None | None | None | N |
Q/H | 0.663 | likely_pathogenic | 0.7071 | pathogenic | -0.627 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.479410659 | None | None | N |
Q/I | 0.5698 | likely_pathogenic | 0.4921 | ambiguous | 0.278 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
Q/K | 0.4492 | ambiguous | 0.6767 | pathogenic | -0.291 | Destabilizing | 0.997 | D | 0.542 | neutral | N | 0.479683346 | None | None | N |
Q/L | 0.3581 | ambiguous | 0.3196 | benign | 0.278 | Stabilizing | 0.997 | D | 0.576 | neutral | N | 0.482744525 | None | None | N |
Q/M | 0.4896 | ambiguous | 0.4117 | ambiguous | 0.525 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
Q/N | 0.6185 | likely_pathogenic | 0.5965 | pathogenic | -0.831 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
Q/P | 0.9657 | likely_pathogenic | 0.9788 | pathogenic | 0.013 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | D | 0.591610809 | None | None | N |
Q/R | 0.5678 | likely_pathogenic | 0.7707 | pathogenic | -0.196 | Destabilizing | 0.997 | D | 0.583 | neutral | N | 0.477729484 | None | None | N |
Q/S | 0.5298 | ambiguous | 0.4956 | ambiguous | -0.947 | Destabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
Q/T | 0.392 | ambiguous | 0.3561 | ambiguous | -0.654 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
Q/V | 0.3974 | ambiguous | 0.3317 | benign | 0.013 | Stabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
Q/W | 0.9661 | likely_pathogenic | 0.9799 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
Q/Y | 0.9037 | likely_pathogenic | 0.9205 | pathogenic | 0.082 | Stabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.