Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16700 | 50323;50324;50325 | chr2:178612427;178612426;178612425 | chr2:179477154;179477153;179477152 |
N2AB | 15059 | 45400;45401;45402 | chr2:178612427;178612426;178612425 | chr2:179477154;179477153;179477152 |
N2A | 14132 | 42619;42620;42621 | chr2:178612427;178612426;178612425 | chr2:179477154;179477153;179477152 |
N2B | 7635 | 23128;23129;23130 | chr2:178612427;178612426;178612425 | chr2:179477154;179477153;179477152 |
Novex-1 | 7760 | 23503;23504;23505 | chr2:178612427;178612426;178612425 | chr2:179477154;179477153;179477152 |
Novex-2 | 7827 | 23704;23705;23706 | chr2:178612427;178612426;178612425 | chr2:179477154;179477153;179477152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.012 | N | 0.161 | 0.074 | 0.126345400529 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1317 | likely_benign | 0.1309 | benign | -0.642 | Destabilizing | 0.012 | N | 0.161 | neutral | N | 0.445109725 | None | None | N |
T/C | 0.7057 | likely_pathogenic | 0.7435 | pathogenic | -0.42 | Destabilizing | 0.996 | D | 0.614 | neutral | None | None | None | None | N |
T/D | 0.8977 | likely_pathogenic | 0.9102 | pathogenic | -0.352 | Destabilizing | 0.742 | D | 0.523 | neutral | None | None | None | None | N |
T/E | 0.7797 | likely_pathogenic | 0.812 | pathogenic | -0.367 | Destabilizing | 0.742 | D | 0.521 | neutral | None | None | None | None | N |
T/F | 0.6953 | likely_pathogenic | 0.7373 | pathogenic | -0.693 | Destabilizing | 0.953 | D | 0.673 | neutral | None | None | None | None | N |
T/G | 0.6898 | likely_pathogenic | 0.6408 | pathogenic | -0.891 | Destabilizing | 0.373 | N | 0.513 | neutral | None | None | None | None | N |
T/H | 0.7691 | likely_pathogenic | 0.7779 | pathogenic | -1.168 | Destabilizing | 0.996 | D | 0.662 | neutral | None | None | None | None | N |
T/I | 0.2927 | likely_benign | 0.3367 | benign | -0.074 | Destabilizing | 0.939 | D | 0.553 | neutral | N | 0.485759245 | None | None | N |
T/K | 0.6569 | likely_pathogenic | 0.7261 | pathogenic | -0.852 | Destabilizing | 0.684 | D | 0.519 | neutral | N | 0.415893674 | None | None | N |
T/L | 0.1897 | likely_benign | 0.2068 | benign | -0.074 | Destabilizing | 0.742 | D | 0.473 | neutral | None | None | None | None | N |
T/M | 0.1453 | likely_benign | 0.1408 | benign | 0.155 | Stabilizing | 0.996 | D | 0.62 | neutral | None | None | None | None | N |
T/N | 0.381 | ambiguous | 0.3665 | ambiguous | -0.717 | Destabilizing | 0.742 | D | 0.441 | neutral | None | None | None | None | N |
T/P | 0.2503 | likely_benign | 0.26 | benign | -0.231 | Destabilizing | 0.939 | D | 0.568 | neutral | N | 0.474748367 | None | None | N |
T/Q | 0.5922 | likely_pathogenic | 0.5997 | pathogenic | -0.885 | Destabilizing | 0.91 | D | 0.604 | neutral | None | None | None | None | N |
T/R | 0.6552 | likely_pathogenic | 0.7318 | pathogenic | -0.564 | Destabilizing | 0.884 | D | 0.573 | neutral | N | 0.466096417 | None | None | N |
T/S | 0.3345 | likely_benign | 0.313 | benign | -0.933 | Destabilizing | 0.028 | N | 0.189 | neutral | N | 0.469199012 | None | None | N |
T/V | 0.1796 | likely_benign | 0.196 | benign | -0.231 | Destabilizing | 0.742 | D | 0.38 | neutral | None | None | None | None | N |
T/W | 0.9398 | likely_pathogenic | 0.9528 | pathogenic | -0.668 | Destabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/Y | 0.7716 | likely_pathogenic | 0.8163 | pathogenic | -0.449 | Destabilizing | 0.984 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.