Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16701 | 50326;50327;50328 | chr2:178612424;178612423;178612422 | chr2:179477151;179477150;179477149 |
N2AB | 15060 | 45403;45404;45405 | chr2:178612424;178612423;178612422 | chr2:179477151;179477150;179477149 |
N2A | 14133 | 42622;42623;42624 | chr2:178612424;178612423;178612422 | chr2:179477151;179477150;179477149 |
N2B | 7636 | 23131;23132;23133 | chr2:178612424;178612423;178612422 | chr2:179477151;179477150;179477149 |
Novex-1 | 7761 | 23506;23507;23508 | chr2:178612424;178612423;178612422 | chr2:179477151;179477150;179477149 |
Novex-2 | 7828 | 23707;23708;23709 | chr2:178612424;178612423;178612422 | chr2:179477151;179477150;179477149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 1.0 | D | 0.715 | 0.37 | 0.566956417683 | gnomAD-4.0.0 | 1.5939E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8622E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5336 | ambiguous | 0.4835 | ambiguous | -1.453 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.518777722 | None | None | N |
V/C | 0.929 | likely_pathogenic | 0.9141 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.9871 | likely_pathogenic | 0.9912 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/E | 0.9523 | likely_pathogenic | 0.9672 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.631769518 | None | None | N |
V/F | 0.7605 | likely_pathogenic | 0.8151 | pathogenic | -1.265 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/G | 0.887 | likely_pathogenic | 0.8911 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.603607762 | None | None | N |
V/H | 0.9859 | likely_pathogenic | 0.9901 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/I | 0.1252 | likely_benign | 0.1314 | benign | -0.774 | Destabilizing | 0.998 | D | 0.502 | neutral | None | None | None | None | N |
V/K | 0.9692 | likely_pathogenic | 0.9839 | pathogenic | -1.211 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/L | 0.7 | likely_pathogenic | 0.7372 | pathogenic | -0.774 | Destabilizing | 0.997 | D | 0.56 | neutral | N | 0.511282992 | None | None | N |
V/M | 0.5581 | ambiguous | 0.5727 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | D | 0.643104867 | None | None | N |
V/N | 0.9384 | likely_pathogenic | 0.9546 | pathogenic | -0.984 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/P | 0.9829 | likely_pathogenic | 0.9851 | pathogenic | -0.965 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9368 | likely_pathogenic | 0.9555 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/R | 0.9574 | likely_pathogenic | 0.9757 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/S | 0.7961 | likely_pathogenic | 0.7954 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/T | 0.5396 | ambiguous | 0.5224 | ambiguous | -1.394 | Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
V/W | 0.9943 | likely_pathogenic | 0.9962 | pathogenic | -1.414 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/Y | 0.9738 | likely_pathogenic | 0.9828 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.