Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16731 | 50416;50417;50418 | chr2:178612334;178612333;178612332 | chr2:179477061;179477060;179477059 |
N2AB | 15090 | 45493;45494;45495 | chr2:178612334;178612333;178612332 | chr2:179477061;179477060;179477059 |
N2A | 14163 | 42712;42713;42714 | chr2:178612334;178612333;178612332 | chr2:179477061;179477060;179477059 |
N2B | 7666 | 23221;23222;23223 | chr2:178612334;178612333;178612332 | chr2:179477061;179477060;179477059 |
Novex-1 | 7791 | 23596;23597;23598 | chr2:178612334;178612333;178612332 | chr2:179477061;179477060;179477059 |
Novex-2 | 7858 | 23797;23798;23799 | chr2:178612334;178612333;178612332 | chr2:179477061;179477060;179477059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.549 | N | 0.362 | 0.225 | 0.511162291539 | gnomAD-4.0.0 | 1.59386E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86236E-06 | 0 | 0 |
I/V | None | None | 0.001 | N | 0.172 | 0.072 | 0.148003135375 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3001 | likely_benign | 0.3361 | benign | -0.42 | Destabilizing | 0.002 | N | 0.195 | neutral | None | None | None | None | I |
I/C | 0.7794 | likely_pathogenic | 0.835 | pathogenic | -0.644 | Destabilizing | 0.977 | D | 0.436 | neutral | None | None | None | None | I |
I/D | 0.9495 | likely_pathogenic | 0.9763 | pathogenic | -0.024 | Destabilizing | 0.92 | D | 0.563 | neutral | None | None | None | None | I |
I/E | 0.8677 | likely_pathogenic | 0.9329 | pathogenic | -0.126 | Destabilizing | 0.85 | D | 0.537 | neutral | None | None | None | None | I |
I/F | 0.361 | ambiguous | 0.4582 | ambiguous | -0.537 | Destabilizing | 0.85 | D | 0.355 | neutral | None | None | None | None | I |
I/G | 0.8734 | likely_pathogenic | 0.8987 | pathogenic | -0.546 | Destabilizing | 0.447 | N | 0.552 | neutral | None | None | None | None | I |
I/H | 0.8549 | likely_pathogenic | 0.931 | pathogenic | 0.14 | Stabilizing | 0.992 | D | 0.545 | neutral | None | None | None | None | I |
I/K | 0.8105 | likely_pathogenic | 0.8983 | pathogenic | -0.17 | Destabilizing | 0.81 | D | 0.547 | neutral | N | 0.476884585 | None | None | I |
I/L | 0.2135 | likely_benign | 0.2405 | benign | -0.222 | Destabilizing | 0.099 | N | 0.267 | neutral | N | 0.46089094 | None | None | I |
I/M | 0.2004 | likely_benign | 0.2422 | benign | -0.343 | Destabilizing | 0.81 | D | 0.365 | neutral | N | 0.481849883 | None | None | I |
I/N | 0.6579 | likely_pathogenic | 0.798 | pathogenic | -0.011 | Destabilizing | 0.92 | D | 0.557 | neutral | None | None | None | None | I |
I/P | 0.9563 | likely_pathogenic | 0.9636 | pathogenic | -0.256 | Destabilizing | 0.92 | D | 0.559 | neutral | None | None | None | None | I |
I/Q | 0.7895 | likely_pathogenic | 0.8797 | pathogenic | -0.231 | Destabilizing | 0.92 | D | 0.555 | neutral | None | None | None | None | I |
I/R | 0.7054 | likely_pathogenic | 0.8251 | pathogenic | 0.35 | Stabilizing | 0.896 | D | 0.558 | neutral | N | 0.478022934 | None | None | I |
I/S | 0.4728 | ambiguous | 0.5944 | pathogenic | -0.453 | Destabilizing | 0.447 | N | 0.485 | neutral | None | None | None | None | I |
I/T | 0.1946 | likely_benign | 0.3223 | benign | -0.447 | Destabilizing | 0.549 | D | 0.362 | neutral | N | 0.478238961 | None | None | I |
I/V | 0.066 | likely_benign | 0.0719 | benign | -0.256 | Destabilizing | 0.001 | N | 0.172 | neutral | N | 0.374105953 | None | None | I |
I/W | 0.9372 | likely_pathogenic | 0.9663 | pathogenic | -0.545 | Destabilizing | 0.992 | D | 0.633 | neutral | None | None | None | None | I |
I/Y | 0.8241 | likely_pathogenic | 0.8852 | pathogenic | -0.283 | Destabilizing | 0.92 | D | 0.447 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.